RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 C1SP09871 688 aa27.91■■■□□ 2.06
CHFR-218ENST00000540963 POLR2EP19388 210 aaKnown RBP27.91■■■□□ 2.06
CHFR-218ENST00000540963 C21orf59P57076 290 aa27.91■■■□□ 2.06
CHFR-218ENST00000540963 BSPRYQ5W0U4 402 aa27.91■■■□□ 2.06
CHFR-218ENST00000540963 DHRS13Q6UX07 377 aa27.91■■■□□ 2.06
CHFR-218ENST00000540963 SEMA4DQ92854 862 aa27.91■■■□□ 2.06
CHFR-218ENST00000540963 NXPE2Q96DL1 559 aa27.91■■■□□ 2.06
CHFR-218ENST00000540963 IPO9Q96P70 1041 aaKnown RBP27.91■■■□□ 2.06
CHFR-218ENST00000540963 UBL7Q96S82 380 aaPredicted RBP27.91■■■□□ 2.06
CHFR-218ENST00000540963 MMRN2Q9H8L6 949 aa27.91■■■□□ 2.06
CHFR-218ENST00000540963 RAB20Q9NX57 234 aa27.91■■■□□ 2.06
CHFR-218ENST00000540963 A0A1W2PPC4 97 aa27.9■■■□□ 2.06
CHFR-218ENST00000540963 IRAK2O43187 625 aa27.9■■■□□ 2.06
CHFR-218ENST00000540963 STX10O60499 249 aa27.9■■■□□ 2.06
CHFR-218ENST00000540963 ABCG1P45844 678 aa27.9■■■□□ 2.06
CHFR-218ENST00000540963 MXI1P50539 228 aa27.9■■■□□ 2.06
CHFR-218ENST00000540963 BST2Q10589 180 aaKnown RBP27.9■■■□□ 2.06
CHFR-218ENST00000540963 ADAM9Q13443 819 aa27.9■■■□□ 2.06
CHFR-218ENST00000540963 KCNT1Q5JUK3 1230 aa27.9■■■□□ 2.06
CHFR-218ENST00000540963 GUF1Q8N442 669 aaKnown RBP27.9■■■□□ 2.06
CHFR-218ENST00000540963 SFMBT1Q9UHJ3 866 aa27.9■■■□□ 2.06
CHFR-218ENST00000540963 TK2O00142 265 aa27.89■■■□□ 2.06
CHFR-218ENST00000540963 YKT6O15498 198 aa27.89■■■□□ 2.06
CHFR-218ENST00000540963 CMA1P23946 247 aa27.89■■■□□ 2.06
CHFR-218ENST00000540963 HNF1BP35680 557 aa27.89■■■□□ 2.06
CHFR-218ENST00000540963 ARID5BQ14865 1188 aa27.89■■■□□ 2.06
CHFR-218ENST00000540963 LAYNQ6UX15 382 aa27.89■■■□□ 2.06
CHFR-218ENST00000540963 ZC3H3Q8IXZ2 948 aaKnown RBP27.89■■■□□ 2.06
CHFR-218ENST00000540963 KDM1BQ8NB78 822 aa27.89■■■□□ 2.06
CHFR-218ENST00000540963 KCTD13Q8WZ19 329 aa27.89■■■□□ 2.06
CHFR-218ENST00000540963 ELF4Q99607 663 aaPredicted RBP27.89■■■□□ 2.06
CHFR-218ENST00000540963 PABPC3Q9H361 631 aaKnown RBP27.89■■■□□ 2.06
CHFR-218ENST00000540963 CNGB3Q9NQW8 809 aa27.89■■■□□ 2.06
CHFR-218ENST00000540963 HESX1Q9UBX0 185 aa27.89■■■□□ 2.06
CHFR-218ENST00000540963 TSPAN16Q9UKR8 245 aa27.89■■■□□ 2.06
CHFR-218ENST00000540963 TPX2Q9ULW0 747 aaKnown RBP27.89■■■□□ 2.06
CHFR-218ENST00000540963 BPTFQ12830 3046 aa27.88■■■□□ 2.05
CHFR-218ENST00000540963 PFKFB1P16118 471 aa27.88■■■□□ 2.05
CHFR-218ENST00000540963 ADIGQ0VDE8 80 aa27.88■■■□□ 2.05
CHFR-218ENST00000540963 GOLGA7BQ2TAP0 167 aa27.88■■■□□ 2.05
CHFR-218ENST00000540963 PIK3R6Q5UE93 754 aa27.88■■■□□ 2.05
CHFR-218ENST00000540963 MSANTD2Q6P1R3 559 aa27.88■■■□□ 2.05
CHFR-218ENST00000540963 UNC45BQ8IWX7 931 aa27.88■■■□□ 2.05
CHFR-218ENST00000540963 NDRG1Q92597 394 aaKnown RBP27.88■■■□□ 2.05
CHFR-218ENST00000540963 AZIN2Q96A70 460 aa27.88■■■□□ 2.05
CHFR-218ENST00000540963 TTC17Q96AE7 1141 aa27.88■■■□□ 2.05
CHFR-218ENST00000540963 HELZ2Q9BYK8 2649 aaKnown RBP27.87■■■□□ 2.05
CHFR-218ENST00000540963 YJEFN3A6XGL0 299 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 E7ENQ6 273 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 RNASEH1O60930 286 aaKnown RBP27.87■■■□□ 2.05
CHFR-218ENST00000540963 IGLV3-27P01718 113 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 ASLP04424 464 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 EDRF1Q3B7T1 1238 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 ZCWPW2Q504Y3 356 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 SGO2Q562F6 1265 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 CCDC157Q569K6 752 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 C6orf118Q5T5N4 469 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 NUGGCQ68CJ6 796 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 SIX6OS1Q8N1H7 587 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 EDEM1Q92611 657 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 FBXL12Q9NXK8 326 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 HPSEQ9Y251 543 aa27.87■■■□□ 2.05
CHFR-218ENST00000540963 C10orf142B7Z368 130 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 TULP2O00295 520 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 ENC1O14682 589 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 SETSIPP0DME0 302 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 CD70P32970 193 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 SLC11A2P49281 568 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 GALCP54803 685 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 ST8SIA6P61647 398 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 HNRNPA1L2Q32P51 320 aaKnown RBP27.86■■■□□ 2.05
CHFR-218ENST00000540963 HSCBQ8IWL3 235 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 FIBINQ8TAL6 211 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 MYO19Q96H55 970 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 LMLNQ96KR4 655 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 ADAMTS1Q9UHI8 967 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 KIAA1257Q9ULG3 409 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 FZD4Q9ULV1 537 aa27.86■■■□□ 2.05
CHFR-218ENST00000540963 A0A1B0GVL5 298 aa27.85■■■□□ 2.05
CHFR-218ENST00000540963 LRRC72A6NJI9 287 aa27.85■■■□□ 2.05
CHFR-218ENST00000540963 LDOC1O95751 146 aaPredicted RBP27.85■■■□□ 2.05
CHFR-218ENST00000540963 JUPP14923 745 aa27.85■■■□□ 2.05
CHFR-218ENST00000540963 SGSHP51688 502 aa27.85■■■□□ 2.05
CHFR-218ENST00000540963 YWHAEP62258 255 aaKnown RBP27.85■■■□□ 2.05
CHFR-218ENST00000540963 IL9RQ01113 521 aa27.85■■■□□ 2.05
CHFR-218ENST00000540963 WFDC5Q8TCV5 224 aa27.85■■■□□ 2.05
CHFR-218ENST00000540963 GANCQ8TET4 914 aa27.85■■■□□ 2.05
CHFR-218ENST00000540963 TATDN2Q93075 761 aa27.85■■■□□ 2.05
CHFR-218ENST00000540963 PLK4O00444 970 aa27.84■■■□□ 2.05
CHFR-218ENST00000540963 MSI1O43347 362 aaKnown RBP27.84■■■□□ 2.05
CHFR-218ENST00000540963 TBL1XO60907 577 aa27.84■■■□□ 2.05
CHFR-218ENST00000540963 RFPL3O75679 317 aa27.84■■■□□ 2.05
CHFR-218ENST00000540963 DNM1Q05193 864 aaKnown RBP27.84■■■□□ 2.05
CHFR-218ENST00000540963 C19orf57Q0VDD7 668 aa27.84■■■□□ 2.05
CHFR-218ENST00000540963 LSM14AQ8ND56 463 aaKnown RBP27.84■■■□□ 2.05
CHFR-218ENST00000540963 OR2T34Q8NGX1 318 aa27.84■■■□□ 2.05
CHFR-218ENST00000540963 SAP25Q8TEE9 199 aa27.84■■■□□ 2.05
CHFR-218ENST00000540963 IRGQQ8WZA9 623 aa27.84■■■□□ 2.05
CHFR-218ENST00000540963 CNDP2Q96KP4 475 aaKnown RBP27.84■■■□□ 2.05
CHFR-218ENST00000540963 SLC6A18Q96N87 628 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms