RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 CBX4O00257 560 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 PLK4O00444 970 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 ENC1O14682 589 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 WNT9AO14904 365 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 XPO1O14980 1071 aaKnown RBP7.61□□□□□ -1.19
YBX3-209ENST00000540747 FSBPO95073 299 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 C1SP09871 688 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 PDIA4P13667 645 aaKnown RBP7.61□□□□□ -1.19
YBX3-209ENST00000540747 TRIM21P19474 475 aaKnown RBP7.61□□□□□ -1.19
YBX3-209ENST00000540747 GTF2H1P32780 548 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 CD70P32970 193 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 TKTL1P51854 596 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 BCAT1P54687 386 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 GALCP54803 685 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 IL9RQ01113 521 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 HNRNPA1L2Q32P51 320 aaKnown RBP7.61□□□□□ -1.19
YBX3-209ENST00000540747 INAVAQ3KP66 663 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 TTC31Q49AM3 519 aaPredicted RBP7.61□□□□□ -1.19
YBX3-209ENST00000540747 PKDCCQ504Y2 493 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 PIK3R6Q5UE93 754 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 CEP135Q66GS9 1140 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 MBLAC2Q68D91 279 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 ZNF776Q68DI1 518 aaPredicted RBP7.61□□□□□ -1.19
YBX3-209ENST00000540747 INTS8Q75QN2 995 aaKnown RBP7.61□□□□□ -1.19
YBX3-209ENST00000540747 RSRC2Q7L4I2 434 aaKnown RBP7.61□□□□□ -1.19
YBX3-209ENST00000540747 FMNL3Q8IVF7 1028 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 CACTIN-AS1Q8N1I8 211 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 TTC39CQ8N584 583 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 UBR7Q8N806 425 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 KDM1BQ8NB78 822 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 RFFLQ8WZ73 363 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 GOLGA1Q92805 767 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 NXPE2Q96DL1 559 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 MYEOVQ96EZ4 313 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 TMEM176AQ96HP8 235 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 PRICKLE1Q96MT3 831 aaPredicted RBP7.61□□□□□ -1.19
YBX3-209ENST00000540747 SLC6A18Q96N87 628 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 ELF4Q99607 663 aaPredicted RBP7.61□□□□□ -1.19
YBX3-209ENST00000540747 IMPG2Q9BZV3 1241 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 NRSN2Q9GZP1 204 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 MTG2Q9H4K7 406 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 TMEM8AQ9HCN3 771 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 CISHQ9NSE2 258 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 OLA1Q9NTK5 396 aaKnown RBP7.61□□□□□ -1.19
YBX3-209ENST00000540747 EXOC1Q9NV70 894 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 INTS6Q9UL03 887 aaKnown RBP7.61□□□□□ -1.19
YBX3-209ENST00000540747 SCML1Q9UN30 329 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 FRMD4BQ9Y2L6 1034 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 RAI2Q9Y5P3 530 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 PLXNA2O75051 1894 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 PTPN13Q12923 2485 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 PIEZO2Q9H5I5 2752 aa7.61□□□□□ -1.19
YBX3-209ENST00000540747 ITIH6Q6UXX5 1313 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 MSI1O43347 362 aaKnown RBP7.6□□□□□ -1.19
YBX3-209ENST00000540747 LATO43561 262 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 RFPL3O75679 317 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 RHOBTB3O94955 611 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 CLSTN1O94985 981 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 KIF20AO95235 890 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 DNTTP04053 509 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 MYL1P05976 194 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 CDK4P11802 303 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 NR2F2P24468 414 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 EPHA8P29322 1005 aaPredicted RBP7.6□□□□□ -1.19
YBX3-209ENST00000540747 SLC6A4P31645 630 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 RXRGP48443 463 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 HARS2P49590 506 aaKnown RBP7.6□□□□□ -1.19
YBX3-209ENST00000540747 CCR5P51681 352 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 NXPH1P58417 271 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 C19orf57Q0VDD7 668 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 DNAJC3Q13217 504 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 ZNF394Q53GI3 561 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 C9orf64Q5T6V5 341 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 BSPRYQ5W0U4 402 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 KRT39Q6A163 491 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 NADSYN1Q6IA69 706 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 NCEH1Q6PIU2 408 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 GATAD2AQ86YP4 633 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 FAM186BQ8IYM0 893 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 ENGASEQ8NFI3 743 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 PIP4K2CQ8TBX8 421 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 KCTD13Q8WZ19 329 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 SLC39A7Q92504 469 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 TATDN2Q93075 761 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 AZIN2Q96A70 460 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 TMA16Q96EY4 203 aaKnown RBP7.6□□□□□ -1.19
YBX3-209ENST00000540747 CNDP2Q96KP4 475 aaKnown RBP7.6□□□□□ -1.19
YBX3-209ENST00000540747 HEXIM2Q96MH2 286 aaKnown RBP7.6□□□□□ -1.19
YBX3-209ENST00000540747 FAM129BQ96TA1 746 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 ACE2Q9BYF1 805 aaPredicted RBP7.6□□□□□ -1.19
YBX3-209ENST00000540747 FAM13BQ9NYF5 915 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 SUN2Q9UH99 717 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 SFMBT1Q9UHJ3 866 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 RCOR1Q9UKL0 485 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 FZD4Q9ULV1 537 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 PLA2G4CQ9UP65 541 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 HPSEQ9Y251 543 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 COQ4Q9Y3A0 265 aa7.6□□□□□ -1.19
YBX3-209ENST00000540747 TP53BP1Q12888 1972 aaPredicted RBP7.6□□□□□ -1.19
YBX3-209ENST00000540747 TLN1Q9Y490 2541 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms