RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 MS4A13Q5J8X5 152 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 STPG1Q5TH74 334 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 TAF3Q5VWG9 929 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 TMEM215Q68D42 235 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 RNF43Q68DV7 783 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 KIAA1324Q6UXG2 1013 aaKnown RBP17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 CHSY1Q86X52 802 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 TMEFF1Q8IYR6 380 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 CARNMT1Q8N4J0 409 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 FRMD1Q8N878 549 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 FIBINQ8TAL6 211 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 SORCS1Q8WY21 1168 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 PIGKQ92643 395 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 MRGPRX1Q96LB2 322 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 NUCKS1Q9H1E3 243 aaKnown RBP17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 PRDM16Q9HAZ2 1276 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 CD248Q9HCU0 757 aa17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 MBD1Q9UIS9 605 aaPredicted RBP17.78■□□□□ 0.44
CACNA2D4-211ENST00000540728 SYNJ2BP-COX16A0A087WUM0 186 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 LSM8O95777 96 aaKnown RBP17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 IGLV3-25P01717 112 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 EPHX1P07099 455 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 TACR2P21452 398 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 CCR1P32246 355 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 CDH5P33151 784 aaPredicted RBP17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 LIMK1P53667 647 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 POLR2FP61218 127 aaKnown RBP17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 RPL6Q02878 288 aaKnown RBP17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 CDH18Q13634 790 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 FUT11Q495W5 492 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 MBLAC2Q68D91 279 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 OLFML1Q6UWY5 402 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 SLC26A9Q7LBE3 791 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 KIAA0907Q7Z7F0 614 aaPredicted RBP17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 ERICH1Q86X53 443 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 LGI2Q8N0V4 545 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 ZNF397Q8NF99 534 aaPredicted RBP17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 DDX1Q92499 740 aaKnown RBP17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 C18orf8Q96DM3 657 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 SPAG5Q96R06 1193 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 GANQ9H2C0 597 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 FAM207AQ9NSI2 230 aaPredicted RBP17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 RRN3Q9NYV6 651 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 COX16Q9P0S2 106 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 LIMA1Q9UHB6 759 aaKnown RBP17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 CYP8B1Q9UNU6 501 aa17.77■□□□□ 0.44
CACNA2D4-211ENST00000540728 KCNU1A8MYU2 1149 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 F5H5T6 163 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 KHNYNO15037 678 aaKnown RBP17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 NDUFS2O75306 463 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 DAB1O75553 588 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 MOCS3O95396 460 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 DLDP09622 509 aaKnown RBP17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 CD70P32970 193 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 NOS2P35228 1153 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 RPS24P62847 133 aaKnown RBP17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 PITX1P78337 314 aaPredicted RBP17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 TYRO3Q06418 890 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 LYSMD4Q5XG99 296 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 RAP1GAP2Q684P5 730 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 NOP9Q86U38 636 aaKnown RBP17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 METTL3Q86U44 580 aaKnown RBP17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 ADIPOR2Q86V24 386 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 ZNF677Q86XU0 584 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 TMPRSS6Q8IU80 811 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 NEK11Q8NG66 645 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 CYB5D2Q8WUJ1 264 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 PRICKLE1Q96MT3 831 aaPredicted RBP17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 STAP1Q9ULZ2 295 aa17.76■□□□□ 0.43
CACNA2D4-211ENST00000540728 GON4LQ3T8J9 2241 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 IGHV1OR15-9A0A0B4J2B8 117 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 LNP1A1A4G5 178 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 PATE3B3GLJ2 98 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 H0Y626 953 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 GFPT2O94808 682 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 LUC7L3O95232 432 aaKnown RBP17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 ACADMP11310 421 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 PRKCHP24723 683 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 MATKP42679 507 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 PTGER3P43115 390 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 KLK7P49862 253 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 RNASE9P60153 205 aaKnown RBP17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 ST8SIA6P61647 398 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 UBXN1Q04323 297 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 NME3Q13232 169 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 SYCP1Q15431 976 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 RABGAP1LQ5R372 815 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 SND1Q7KZF4 910 aaKnown RBP eCLIP17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 SYT12Q8IV01 421 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 CFAP52Q8N1V2 620 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 WFDC5Q8TCV5 224 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 EPS8L1Q8TE68 723 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 PRCCQ92733 491 aaPredicted RBP17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 SIPA1Q96FS4 1042 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 SLC6A17Q9H1V8 727 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 NLRC4Q9NPP4 1024 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 TMEM51Q9NW97 253 aa17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 KIAA1522Q9P206 1035 aaPredicted RBP17.75■□□□□ 0.43
CACNA2D4-211ENST00000540728 XPO7Q9UIA9 1087 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms