RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 SIK2Q9H0K1 926 aa14.52□□□□□ -0.09
INO80E-203ENST00000540562 ASB7Q9H672 318 aa14.52□□□□□ -0.09
INO80E-203ENST00000540562 LNPEPQ9UIQ6 1025 aa14.52□□□□□ -0.09
INO80E-203ENST00000540562 EMCNQ9ULC0 261 aa14.52□□□□□ -0.09
INO80E-203ENST00000540562 PARP14Q460N5 1801 aa14.52□□□□□ -0.09
INO80E-203ENST00000540562 HTTP42858 3142 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 ENDOD1O94919 500 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 IREB2P48200 963 aaKnown RBP14.51□□□□□ -0.09
INO80E-203ENST00000540562 SLC9A4Q6AI14 798 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 NXNQ6DKJ4 435 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 PACS1Q6VY07 963 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 CHSY1Q86X52 802 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 PPP4R1Q8TF05 950 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 ANLNQ9NQW6 1124 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 LRRC42Q9Y546 428 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 AIM2O14862 343 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 ITGA2BP08514 1039 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 DESP17661 470 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 TGM2P21980 687 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 TEX44Q53QW1 395 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 RPS27LQ71UM5 84 aaKnown RBP14.51□□□□□ -0.09
INO80E-203ENST00000540562 FCRL3Q96P31 734 aaPredicted RBP14.51□□□□□ -0.09
INO80E-203ENST00000540562 CYP3A43Q9HB55 503 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 RNF181Q9P0P0 153 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 ITGA11Q9UKX5 1188 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 PAPPA2Q9BXP8 1791 aa14.51□□□□□ -0.09
INO80E-203ENST00000540562 LTFP02788 710 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 CHRNGP07510 517 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 SH3D19Q5HYK7 790 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 PPM1LQ5SGD2 360 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 MAVSQ7Z434 540 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 PTAR1Q7Z6K3 402 aaPredicted RBP14.5□□□□□ -0.09
INO80E-203ENST00000540562 STRA8Q7Z7C7 330 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 WDR75Q8IWA0 830 aaKnown RBP14.5□□□□□ -0.09
INO80E-203ENST00000540562 DEFB107AQ8IZN7 70 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 ZNF567Q8N184 647 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 ATP2A3Q93084 1043 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 VPS33BQ9H267 617 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 APOBEC2Q9Y235 224 aaKnown RBP14.5□□□□□ -0.09
INO80E-203ENST00000540562 RGPD3A6NKT7 1758 aaPredicted RBP14.5□□□□□ -0.09
INO80E-203ENST00000540562 RGPD4Q7Z3J3 1758 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 ZNF638Q14966 1978 aaKnown RBP14.5□□□□□ -0.09
INO80E-203ENST00000540562 WFS1O76024 890 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 LUC7L3O95232 432 aaKnown RBP14.5□□□□□ -0.09
INO80E-203ENST00000540562 HOXA11P31270 313 aaPredicted RBP14.5□□□□□ -0.09
INO80E-203ENST00000540562 ZNF781Q8N8C0 355 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 RNF139Q8WU17 664 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 USP13Q92995 863 aaPredicted RBP14.5□□□□□ -0.09
INO80E-203ENST00000540562 FAM136AQ96C01 138 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 OMDQ99983 421 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 SSU72Q9NP77 194 aaKnown RBP14.5□□□□□ -0.09
INO80E-203ENST00000540562 CHRAC1Q9NRG0 131 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 PIGVQ9NUD9 493 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.5□□□□□ -0.09
INO80E-203ENST00000540562 TAGLN3Q9UI15 199 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 SLC39A10Q9ULF5 831 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 PCDHA11Q9Y5I1 949 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 BCLAF3A2AJT9 711 aaKnown RBP14.5□□□□□ -0.09
INO80E-203ENST00000540562 PRKCHP24723 683 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 BEX3Q00994 111 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 FBXO47Q5MNV8 452 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 TMEM198Q66K66 360 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 RNF135Q8IUD6 432 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 TEKT4Q8WW24 435 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 C16orf70Q9BSU1 422 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 PPCSQ9HAB8 311 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 LRRC4Q9HBW1 653 aa14.5□□□□□ -0.09
INO80E-203ENST00000540562 SDR42E2A6NKP2 422 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 TK2O00142 265 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 TRAFD1O14545 582 aaPredicted RBP14.49□□□□□ -0.09
INO80E-203ENST00000540562 CTSHP09668 335 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 GNAT1P11488 350 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 ANPEPP15144 967 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 SP100P23497 879 aaPredicted RBP14.49□□□□□ -0.09
INO80E-203ENST00000540562 INCA1Q0VD86 236 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 MARCH8Q5T0T0 291 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 TEDDM1Q5T9Z0 273 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 WSCD1Q658N2 575 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 ZNF280DQ6N043 979 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 RWDD4Q6NW29 188 aaKnown RBP14.49□□□□□ -0.09
INO80E-203ENST00000540562 NAPRTQ6XQN6 538 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 DCLK2Q8N568 766 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 ENDOVQ8N8Q3 282 aaKnown RBP14.49□□□□□ -0.09
INO80E-203ENST00000540562 PIWIL2Q8TC59 973 aaKnown RBP14.49□□□□□ -0.09
INO80E-203ENST00000540562 RNF34Q969K3 372 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 ZNF670Q9BS34 389 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 NDE1Q9NXR1 346 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 KCNK4Q9NYG8 393 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 SIRPGQ9P1W8 387 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 TTC3P53804 2025 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 A0A0G2JLL6 359 aaPredicted RBP14.49□□□□□ -0.09
INO80E-203ENST00000540562 KPNA7A9QM74 516 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 NRP1O14786 923 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 GAS2O43903 313 aaKnown RBP14.49□□□□□ -0.09
INO80E-203ENST00000540562 SIN3BO75182 1162 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 HSPA4LO95757 839 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 USP17L7P0C7H9 530 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 FGF3P11487 239 aaPredicted RBP14.49□□□□□ -0.09
INO80E-203ENST00000540562 EPHA3P29320 983 aa14.49□□□□□ -0.09
INO80E-203ENST00000540562 ATICP31939 592 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms