RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 ALDH6A1Q02252 535 aaKnown RBP8.94□□□□□ -0.98
YBX3-208ENST00000540447 ORC2Q13416 577 aaPredicted RBP8.94□□□□□ -0.98
YBX3-208ENST00000540447 INO80DQ53TQ3 878 aaPredicted RBP8.94□□□□□ -0.98
YBX3-208ENST00000540447 OLFML2AQ68BL7 652 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 SLFN12LQ6IEE8 588 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 KCTD8Q6ZWB6 473 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 USP49Q70CQ1 688 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 SLC7A5P1Q8MH63 180 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 CCDC24Q8N4L8 307 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 DPP10Q8N608 796 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 CCDC185Q8N715 623 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 TP53INP1Q96A56 240 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 INO80BQ9C086 356 aaPredicted RBP8.94□□□□□ -0.98
YBX3-208ENST00000540447 OR2B2Q9GZK3 357 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 NYXQ9GZU5 481 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 TMLHEQ9NVH6 421 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.94□□□□□ -0.98
YBX3-208ENST00000540447 PEX16Q9Y5Y5 336 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 H3BSA7 217 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 ORC5O43913 435 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 GLRBP48167 497 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 BNIP3Q12983 259 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 SUZ12Q15022 739 aaKnown RBP8.94□□□□□ -0.98
YBX3-208ENST00000540447 C11orf91Q3C1V1 193 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 ZNF568Q3ZCX4 644 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 SYTL3Q4VX76 610 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 CACHD1Q5VU97 1274 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 PALB2Q86YC2 1186 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 ZNF671Q8TAW3 534 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 NEK6Q9HC98 313 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 GMIPQ9P107 970 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 LRRC42Q9Y546 428 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 AK9Q5TCS8 1911 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 PRAMEF33A0A0G2JMD5 474 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 PRAMEF10O60809 474 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 PGK1P00558 417 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 ITGA3P26006 1051 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 RBL1P28749 1068 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 PRIM2P49643 509 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 PSME3P61289 254 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 CD83Q01151 205 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 MOGQ16653 247 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 PROSER1Q86XN7 944 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 CYP4Z2PQ8N1L4 340 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 CLPTM1LQ96KA5 538 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 VPS35Q96QK1 796 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 NRBP2Q9NSY0 501 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 EXD2Q9NVH0 621 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 GDAP2Q9NXN4 497 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 TFCP2L1Q9NZI6 479 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 RGSL1A5PLK6 1076 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 ZNF197O14709 1029 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 ANXA6P08133 673 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 MYL4P12829 197 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 STIP1P31948 543 aaKnown RBP8.94□□□□□ -0.98
YBX3-208ENST00000540447 PIWIL2Q8TC59 973 aaKnown RBP8.94□□□□□ -0.98
YBX3-208ENST00000540447 SPIRE2Q8WWL2 714 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 GTPBP2Q9BX10 602 aaKnown RBP8.94□□□□□ -0.98
YBX3-208ENST00000540447 FRMD8P1Q9BZ68 369 aaPredicted RBP8.94□□□□□ -0.98
YBX3-208ENST00000540447 ZC3H12CQ9C0D7 883 aaKnown RBP8.94□□□□□ -0.98
YBX3-208ENST00000540447 RSAD1Q9HA92 442 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 POLIQ9UNA4 740 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 POGZQ7Z3K3 1410 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 A0A0J9YVX5 310 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 A0A0U1RQJ8 604 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 TIMM44O43615 452 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 PRKAB2O43741 272 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 H6PDO95479 791 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 ASNSP08243 561 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 GSTT2P0CG29 244 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 GSTT2BP0CG30 244 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 RCAN1P53805 252 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 CYP4F2P78329 520 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 CYP4F3Q08477 520 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 CCNG2Q16589 344 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 ANKDD1AQ495B1 522 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 PABPC1LQ4VXU2 614 aaKnown RBP8.94□□□□□ -0.98
YBX3-208ENST00000540447 GPATCH4Q5T3I0 446 aaKnown RBP8.94□□□□□ -0.98
YBX3-208ENST00000540447 OGFOD2Q6N063 350 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 TBC1D10CQ8IV04 446 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 BRSK2Q8IWQ3 736 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 GRHL1Q9NZI5 618 aa8.94□□□□□ -0.98
YBX3-208ENST00000540447 H0YJX3 145 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 CDH1P12830 882 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 SGO1Q5FBB7 561 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 EFHC2Q5JST6 749 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 PYHIN1Q6K0P9 492 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 TIGD7Q6NT04 549 aaPredicted RBP8.93□□□□□ -0.98
YBX3-208ENST00000540447 ANKRD49Q8WVL7 239 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 PFDN5Q99471 154 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 PHF11Q9UIL8 331 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 SSR3Q9UNL2 185 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 CHURC1-FNTBB4DL54 471 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 EML1O00423 815 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 PEX11AO75192 247 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 ENTPD1P49961 510 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 CDK9P50750 372 aaKnown RBP8.93□□□□□ -0.98
YBX3-208ENST00000540447 UBXN2AP68543 259 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 ZNF699Q32M78 642 aa8.93□□□□□ -0.98
YBX3-208ENST00000540447 P2RY8Q86VZ1 359 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms