RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 HNRNPH3P31942 346 aaKnown RBP11.35□□□□□ -0.59
PBX1-212ENST00000540236 STIP1P31948 543 aaKnown RBP11.35□□□□□ -0.59
PBX1-212ENST00000540236 PHKA2P46019 1235 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 CDKL1Q00532 357 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 PLEKHG4Q58EX7 1191 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 RAP1GAP2Q684P5 730 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 VPS35Q96QK1 796 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 TCF7L2Q9NQB0 619 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 NEXMIFQ5QGS0 1516 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 A0A088AWK7 358 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 FOXP2O15409 715 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 ADAM23O75077 832 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 TNNC2P02585 160 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 PABPC1P11940 636 aaKnown RBP11.35□□□□□ -0.59
PBX1-212ENST00000540236 HIBADHP31937 336 aaKnown RBP11.35□□□□□ -0.59
PBX1-212ENST00000540236 GTF2H1P32780 548 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 HTR2BP41595 481 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 NUMBP49757 651 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 PRKAA2P54646 552 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 SLC18A2Q05940 514 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 PIWIL3Q7Z3Z3 882 aaKnown RBP11.35□□□□□ -0.59
PBX1-212ENST00000540236 DHFR2Q86XF0 187 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 RCOR2Q8IZ40 523 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 KCNS3Q9BQ31 491 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.35□□□□□ -0.59
PBX1-212ENST00000540236 SNTG2Q9NY99 539 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 SLC24A2Q9UI40 661 aa11.35□□□□□ -0.59
PBX1-212ENST00000540236 WEE1P30291 646 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 PSMC5P62195 406 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 FGD3Q5JSP0 725 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 FAM117BQ6P1L5 589 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 SPPL2CQ8IUH8 684 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 DSELQ8IZU8 1212 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 NETO2Q8NC67 525 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 TDRD1Q9BXT4 1180 aaKnown RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 BCAS3Q9H6U6 928 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 CCDC177Q9NQR7 707 aaPredicted RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 CACNA2D2Q9NY47 1150 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 RPL26L1Q9UNX3 145 aaKnown RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 FNDC3AQ9Y2H6 1198 aaKnown RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 BOLA1Q9Y3E2 137 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 FADS2O95864 444 aaKnown RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 IL6STP40189 918 aaPredicted RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 TRAF3Q13114 568 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 RAB39AQ14964 217 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 ZNF362Q5T0B9 420 aaPredicted RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 ANKRD22Q5VYY1 191 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 PLEKHM3Q6ZWE6 761 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 THNSL1Q8IYQ7 743 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 ACCSQ96QU6 501 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 EFCAB1Q9HAE3 211 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 N4BP2Q86UW6 1770 aaPredicted RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 MYH1P12882 1939 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 A8MUA0 341 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 VWA5AO00534 786 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 XYLBO75191 536 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 SERPINB7O75635 380 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 ATE1O95260 518 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 GPX6P59796 221 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 SNRPD2P62316 118 aaKnown RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 IFRD2Q12894 506 aaPredicted RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 DMC1Q14565 340 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 SNX17Q15036 470 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 EXD2Q9NVH0 621 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 THAP1Q9NVV9 213 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 MAP10Q9P2G4 905 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 IP6K2Q9UHH9 426 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 PPME1Q9Y570 386 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 C16orf96A6NNT2 1141 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 FAM47E-STBD1D6RA91 191 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 ANGPT2O15123 496 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 NOS1APO75052 506 aaPredicted RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 EIF2S1P05198 315 aaKnown RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 GTF2E2P29084 291 aaKnown RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 NRLP54845 237 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 ZMYND11Q15326 602 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 OSBPL11Q9BXB4 747 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 KCNMB3Q9NPA1 279 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 COPG2Q9UBF2 871 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 KLQ9UEF7 1012 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 ABCA9Q8IUA7 1624 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 MYH2Q9UKX2 1941 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 HEATR9A2RTY3 570 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 BIRC5O15392 142 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 SCO1O75880 301 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 GCP02774 474 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 ELK4P28324 431 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 LIG4P49917 911 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 EFR3AQ14156 821 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 GRM4Q14833 912 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 CYP51A1Q16850 503 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.34□□□□□ -0.59
PBX1-212ENST00000540236 CADM2Q8N3J6 435 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 RIBC2Q9H4K1 309 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 C8orf4Q9NR00 106 aa11.34□□□□□ -0.59
PBX1-212ENST00000540236 MRPL42Q9Y6G3 142 aaKnown RBP11.34□□□□□ -0.59
PBX1-212ENST00000540236 PREX2Q70Z35 1606 aa11.33□□□□□ -0.6
PBX1-212ENST00000540236 HNRNPDLO14979 420 aaKnown RBP11.33□□□□□ -0.6
PBX1-212ENST00000540236 CLASP2O75122 1294 aaKnown RBP11.33□□□□□ -0.6
PBX1-212ENST00000540236 XRCC1P18887 633 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms