RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SLC34A1Q06495 639 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 ZNF268Q14587 947 aaPredicted RBP10.25□□□□□ -0.77
TRAF1-202ENST00000540010 C16orf46Q6P387 395 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 LRRN4Q8WUT4 740 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 ILKAPQ9H0C8 392 aaPredicted RBP10.25□□□□□ -0.77
TRAF1-202ENST00000540010 LRRC19Q9H756 370 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 GOLGA2P5Q9HBQ8 144 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 HACD3Q9P035 362 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 DERAQ9Y315 318 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 SMIM28A0A1B0GU29 152 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 E5RJQ4 531 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 CA12O43570 354 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 PMPCBO75439 489 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 RALBP11234 206 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 TCF4P15884 667 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 MMP13P45452 471 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 TMEM40Q8WWA1 233 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 USP13Q92995 863 aaPredicted RBP10.25□□□□□ -0.77
TRAF1-202ENST00000540010 ARHGAP39Q9C0H5 1083 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 CYP4F12Q9HCS2 524 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 XPNPEP3Q9NQH7 507 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 R3HDM2Q9Y2K5 976 aaKnown RBP10.25□□□□□ -0.77
TRAF1-202ENST00000540010 LRCH1Q9Y2L9 728 aa10.25□□□□□ -0.77
TRAF1-202ENST00000540010 MBLAC1A4D2B0 266 aaPredicted RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 GOLGA8CPA6NN73 597 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 SHOX2O60902 331 aaPredicted RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 THPOP40225 353 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 HADHAP40939 763 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 DRG2P55039 364 aaKnown RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 PLOD1Q02809 727 aaPredicted RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 SV2CQ496J9 727 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 C9orf57Q5W0N0 161 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 LRRC74BQ6ZQY2 392 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 FRA10AC1Q70Z53 315 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 TMPRSS6Q8IU80 811 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 RMDN1Q96DB5 314 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 FAXDC2Q96IV6 333 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 RNF39Q9H2S5 420 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 CHST12Q9NRB3 414 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 APPL1Q9UKG1 709 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 Q9Y3F1 56 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 IPPQ9Y573 584 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 FAM237BA0A1B0GVD1 139 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 MAP4P27816 1152 aaKnown RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 PNPLA4P41247 253 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 PTGIRP43119 386 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 PTDSS1P48651 473 aaKnown RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 NME5P56597 212 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 PTK6Q13882 451 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 THEMIS2Q5TEJ8 643 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 LRRC52Q8N7C0 313 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 CATSPER1Q8NEC5 780 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 PYDC1Q8WXC3 89 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 SPOCK2Q92563 424 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 PBXIP1Q96AQ6 731 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 ULK4Q96C45 1275 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 OXNAD1Q96HP4 312 aaPredicted RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 FAM8A1Q9UBU6 413 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 TAGLN3Q9UI15 199 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 SNX13Q9Y5W8 968 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 A0A1W2PPM1 405 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 MYADML2A6NDP7 307 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 TM9SF1O15321 606 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 ATXN8OSP0DMR3 200 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 STMN1P16949 149 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 MRPS6P82932 125 aaKnown RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 OGDHQ02218 1023 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 PDK1Q15118 436 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 PPP1R26Q5T8A7 1209 aaPredicted RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 C16orf89Q6UX73 402 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 XYLT1Q86Y38 959 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 ZDHHC14Q8IZN3 488 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 TFB1MQ8WVM0 346 aaKnown RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 SLITRK1Q96PX8 696 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 ZBTB18Q99592 522 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 SP110Q9HB58 689 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 FBXO6Q9NRD1 293 aaPredicted RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 GJD2Q9UKL4 321 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 GABRQQ9UN88 632 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 CDYLQ9Y232 598 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 MRPL42Q9Y6G3 142 aaKnown RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 EME2A4GXA9 379 aaPredicted RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 E5RI56 91 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 M0QYT0 321 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 DCXO43602 365 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 PROCP04070 461 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 ABCG1P45844 678 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 NCALDP61601 193 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 DAB2P98082 770 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 MAPRE2Q15555 327 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 EFHC1Q5JVL4 640 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 BTBD8Q5XKL5 378 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 EGFL8Q99944 293 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 CXCL16Q9H2A7 254 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 VRTNQ9H8Y1 702 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 DDX18Q9NVP1 670 aaKnown RBP10.24□□□□□ -0.77
TRAF1-202ENST00000540010 ARHGEF38Q9NXL2 777 aa10.24□□□□□ -0.77
TRAF1-202ENST00000540010 GGA2Q9UJY4 613 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms