RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 PHF13Q86YI8 300 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-212ENST00000539975 TREML1Q86YW5 311 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 TMTC1Q8IUR5 882 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 CPA6Q8N4T0 437 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 WDTC1Q8N5D0 677 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 SPC24Q8NBT2 197 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 CCDC26Q8TAB7 109 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 CTNNBL1Q8WYA6 563 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-212ENST00000539975 FGF14Q92915 247 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 USP13Q92995 863 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-212ENST00000539975 PLD4Q96BZ4 506 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 PANX2Q96RD6 677 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 DNAJC7Q99615 494 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 NCAPGQ9BPX3 1015 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 C11orf70Q9BRQ4 267 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 RNF38Q9H0F5 515 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 SMG9Q9H0W8 520 aaKnown RBP6.74□□□□□ -1.33
SNHG1-212ENST00000539975 NHEJ1Q9H9Q4 299 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-212ENST00000539975 NMUR1Q9HB89 426 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 GKN1Q9NS71 199 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.74□□□□□ -1.33
SNHG1-212ENST00000539975 CFAP97Q9P2B7 532 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 LCMT1Q9UIC8 334 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 NUDT5Q9UKK9 219 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 MRPS17Q9Y2R5 130 aaKnown RBP6.74□□□□□ -1.33
SNHG1-212ENST00000539975 HBS1LQ9Y450 684 aaKnown RBP6.74□□□□□ -1.33
SNHG1-212ENST00000539975 TRIP11Q15643 1979 aa6.74□□□□□ -1.33
SNHG1-212ENST00000539975 SYNJ2BP-COX16A0A087WUM0 186 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 M0QYT0 321 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 MAN2B1O00754 1011 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 NCAM2O15394 837 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 TADA3O75528 432 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 GRAP2O75791 330 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 MAP3K6O95382 1288 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 TBX18O95935 607 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 ERBB2P04626 1255 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 UNGP13051 313 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-212ENST00000539975 GLULP15104 373 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 TCF3P15923 654 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 PDGFRAP16234 1089 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 CHRNB2P17787 502 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 CCR1P32246 355 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 EIF4A3P38919 411 aaKnown RBP6.73□□□□□ -1.33
SNHG1-212ENST00000539975 SULT1E1P49888 294 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 GPC5P78333 572 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 DEUP1Q05D60 604 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 FCHO2Q0JRZ9 810 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 NME3Q13232 169 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 GRM2Q14416 872 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 PCSK7Q16549 785 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 SLC18A3Q16572 532 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 ANO4Q32M45 955 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 ITPRIPL2Q3MIP1 535 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 PTPN20Q4JDL3 420 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 ODF2Q5BJF6 829 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 VITQ6UXI7 678 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 LRRC31Q6UY01 552 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 CHSY3Q70JA7 882 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 XYLT1Q86Y38 959 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 CCDC170Q8IYT3 715 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 MCOLN2Q8IZK6 566 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 DEFB106AQ8N104 65 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 ATP6V0D2Q8N8Y2 350 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 C3orf20Q8ND61 904 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 ST13P5Q8NFI4 369 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-212ENST00000539975 CLEC4CQ8WTT0 213 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 OSCP1Q8WVF1 389 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 RSAD2Q8WXG1 361 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 NDRG1Q92597 394 aaKnown RBP6.73□□□□□ -1.33
SNHG1-212ENST00000539975 DNASE1L2Q92874 299 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 ZNF653Q96CK0 615 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 MSANTD3Q96H12 275 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 NECAB3Q96P71 396 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-212ENST00000539975 XPO6Q96QU8 1125 aaKnown RBP6.73□□□□□ -1.33
SNHG1-212ENST00000539975 NELL2Q99435 816 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 BAG1Q99933 345 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-212ENST00000539975 SAP130Q9H0E3 1048 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 WDCPQ9H6R7 721 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 C8orf33Q9H7E9 229 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-212ENST00000539975 DDIT4Q9NX09 232 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 COX16Q9P0S2 106 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 STIM2Q9P246 746 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 MYO1AQ9UBC5 1043 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 WNT16Q9UBV4 365 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 TJP2Q9UDY2 1190 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 CNOT8Q9UFF9 292 aaKnown RBP6.73□□□□□ -1.33
SNHG1-212ENST00000539975 SFMBT1Q9UHJ3 866 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 CYTH4Q9UIA0 394 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 MUTYHQ9UIF7 546 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 DUSP12Q9UNI6 340 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 NAALADL1Q9UQQ1 740 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 TLR6Q9Y2C9 796 aa6.73□□□□□ -1.33
SNHG1-212ENST00000539975 VWA8A3KMH1 1905 aa6.72□□□□□ -1.33
SNHG1-212ENST00000539975 A0A087X0T9 212 aa6.72□□□□□ -1.33
SNHG1-212ENST00000539975 FAM170AA1A519 330 aa6.72□□□□□ -1.33
SNHG1-212ENST00000539975 SIGLEC16A6NMB1 481 aa6.72□□□□□ -1.33
SNHG1-212ENST00000539975 DAB1O75553 588 aa6.72□□□□□ -1.33
SNHG1-212ENST00000539975 PRAMEF12O95522 483 aa6.72□□□□□ -1.33
SNHG1-212ENST00000539975 LATS1O95835 1130 aa6.72□□□□□ -1.33
SNHG1-212ENST00000539975 OLFM2O95897 454 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms