RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 SYCP2LQ5T4T6 812 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 SH3PXD2AQ5TCZ1 1133 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 SYPL2Q5VXT5 272 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 SMYD5Q6GMV2 418 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 NUP62CLQ9H1M0 184 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 TMEM245Q9H330 911 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 SIX2Q9NPC8 291 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 FSCN3Q9NQT6 498 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 ITM2CQ9NQX7 267 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 SUSD2Q9UGT4 822 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 DACH1Q9UI36 760 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 PLA2G4CQ9UP65 541 aa23.04■■□□□ 1.28
SCARB1-206ENST00000539320 KCNJ18B7U540 433 aa23.03■■□□□ 1.28
SCARB1-206ENST00000539320 IGLV3-19P01714 112 aa23.03■■□□□ 1.28
SCARB1-206ENST00000539320 ATP5BP06576 529 aaKnown RBP23.03■■□□□ 1.28
SCARB1-206ENST00000539320 POLR2EP19388 210 aaKnown RBP23.03■■□□□ 1.28
SCARB1-206ENST00000539320 RPS24P62847 133 aaKnown RBP23.03■■□□□ 1.28
SCARB1-206ENST00000539320 PTPRNQ16849 979 aa23.03■■□□□ 1.28
SCARB1-206ENST00000539320 MS4A13Q5J8X5 152 aa23.03■■□□□ 1.28
SCARB1-206ENST00000539320 PASD1Q8IV76 773 aa23.03■■□□□ 1.28
SCARB1-206ENST00000539320 ZNF366Q8N895 744 aa23.03■■□□□ 1.28
SCARB1-206ENST00000539320 MYEOVQ96EZ4 313 aa23.03■■□□□ 1.28
SCARB1-206ENST00000539320 GTPBP2Q9BX10 602 aaKnown RBP23.03■■□□□ 1.28
SCARB1-206ENST00000539320 GPR174Q9BXC1 333 aa23.03■■□□□ 1.28
SCARB1-206ENST00000539320 LHX5Q9H2C1 402 aa23.03■■□□□ 1.28
SCARB1-206ENST00000539320 FBRSQ9HAH7 460 aa23.03■■□□□ 1.28
SCARB1-206ENST00000539320 TJP2Q9UDY2 1190 aa23.03■■□□□ 1.28
SCARB1-206ENST00000539320 AJAP1Q9UKB5 411 aaPredicted RBP23.03■■□□□ 1.28
SCARB1-206ENST00000539320 ANGPTL2Q9UKU9 493 aa23.03■■□□□ 1.28
SCARB1-206ENST00000539320 PCDHGC3Q9UN70 934 aa23.03■■□□□ 1.28
SCARB1-206ENST00000539320 GIPC1O14908 333 aa23.02■■□□□ 1.28
SCARB1-206ENST00000539320 TRUB2O95900 331 aaKnown RBP23.02■■□□□ 1.28
SCARB1-206ENST00000539320 IGLV3-25P01717 112 aa23.02■■□□□ 1.28
SCARB1-206ENST00000539320 YWHAZP63104 245 aaKnown RBP23.02■■□□□ 1.28
SCARB1-206ENST00000539320 ZNF252P-AS1Q0IIN9 211 aa23.02■■□□□ 1.28
SCARB1-206ENST00000539320 CDH18Q13634 790 aa23.02■■□□□ 1.28
SCARB1-206ENST00000539320 CHSY1Q86X52 802 aa23.02■■□□□ 1.28
SCARB1-206ENST00000539320 FIBINQ8TAL6 211 aa23.02■■□□□ 1.28
SCARB1-206ENST00000539320 LMLNQ96KR4 655 aa23.02■■□□□ 1.28
SCARB1-206ENST00000539320 CPXM1Q96SM3 734 aa23.02■■□□□ 1.28
SCARB1-206ENST00000539320 XPO7Q9UIA9 1087 aaKnown RBP23.02■■□□□ 1.28
SCARB1-206ENST00000539320 DNAJC12Q9UKB3 198 aa23.02■■□□□ 1.28
SCARB1-206ENST00000539320 NUMA1Q14980 2115 aa23.02■■□□□ 1.28
SCARB1-206ENST00000539320 PRKCSHP14314 528 aaPredicted RBP23.01■■□□□ 1.27
SCARB1-206ENST00000539320 GNSP15586 552 aa23.01■■□□□ 1.27
SCARB1-206ENST00000539320 ERCC5P28715 1186 aaPredicted RBP23.01■■□□□ 1.27
SCARB1-206ENST00000539320 PTK2Q05397 1052 aa23.01■■□□□ 1.27
SCARB1-206ENST00000539320 ZC3H12AQ5D1E8 599 aaKnown RBP23.01■■□□□ 1.27
SCARB1-206ENST00000539320 CCDC117Q8IWD4 279 aaPredicted RBP23.01■■□□□ 1.27
SCARB1-206ENST00000539320 CARNMT1Q8N4J0 409 aa23.01■■□□□ 1.27
SCARB1-206ENST00000539320 C1orf131Q8NDD1 294 aaKnown RBP23.01■■□□□ 1.27
SCARB1-206ENST00000539320 CADM4Q8NFZ8 388 aa23.01■■□□□ 1.27
SCARB1-206ENST00000539320 NOX5Q96PH1 765 aa23.01■■□□□ 1.27
SCARB1-206ENST00000539320 FAM204AQ9H8W3 233 aa23.01■■□□□ 1.27
SCARB1-206ENST00000539320 ASNSD1Q9NWL6 643 aa23.01■■□□□ 1.27
SCARB1-206ENST00000539320 NFE2L3Q9Y4A8 694 aa23.01■■□□□ 1.27
SCARB1-206ENST00000539320 ADAMTS9Q9P2N4 1935 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 GLI1P08151 1106 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 SYPP08247 313 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 CEACAM1P13688 526 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 PITX1P78337 314 aaPredicted RBP23■■□□□ 1.27
SCARB1-206ENST00000539320 TAF5Q15542 800 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 DCAF6Q58WW2 860 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 RAP1GAP2Q684P5 730 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 LGI2Q8N0V4 545 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 HDDC3Q8N4P3 179 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 DEFB124Q8NES8 71 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 TTC17Q96AE7 1141 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 PPP1R13BQ96KQ4 1090 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 BTN2A3PQ96KV6 586 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 SLC2A13Q96QE2 648 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 NUP58Q9BVL2 599 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 NDST4Q9H3R1 872 aa23■■□□□ 1.27
SCARB1-206ENST00000539320 ARHGAP33O14559 1287 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 HSF2BPO75031 334 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 LUC7L3O95232 432 aaKnown RBP22.99■■□□□ 1.27
SCARB1-206ENST00000539320 ASLP04424 464 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 C7P10643 843 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 TACR2P21452 398 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 MAOBP27338 520 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 CSKP41240 450 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 SHC2P98077 582 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 CDK17Q00537 523 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 PLEKHG6Q3KR16 790 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 VWA3BQ502W6 1294 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 MIIPQ5JXC2 388 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 CFAP52Q8N1V2 620 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 WDTC1Q8N5D0 677 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 MINDY1Q8N5J2 469 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 ATP6V0D2Q8N8Y2 350 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 DNASE2BQ8WZ79 361 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 TUBGCP2Q9BSJ2 902 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 PRSS16Q9NQE7 514 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 SUN2Q9UH99 717 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 INTS6Q9UL03 887 aaKnown RBP22.99■■□□□ 1.27
SCARB1-206ENST00000539320 CEP83Q9Y592 693 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 CEP295Q9C0D2 2601 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 PCNX2A6NKB5 2137 aa22.99■■□□□ 1.27
SCARB1-206ENST00000539320 OPHN1O60890 802 aa22.98■■□□□ 1.27
SCARB1-206ENST00000539320 PNMA6AP0CW24 399 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms