RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 EIF3EP60228 445 aaKnown RBP15.9■□□□□ 0.14
VAMP1-207ENST00000539047 HYAL1Q12794 435 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 SNX1Q13596 522 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 BYSLQ13895 437 aaKnown RBP15.9■□□□□ 0.14
VAMP1-207ENST00000539047 NOMO1Q15155 1222 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 PPP1R7Q15435 360 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 SIX1Q15475 284 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-207ENST00000539047 TEAD2Q15562 447 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 MS4A13Q5J8X5 152 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 RAP1GAP2Q684P5 730 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 CES5AQ6NT32 575 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 DRICH1Q6PGQ1 229 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-207ENST00000539047 TMEM184AQ6ZMB5 413 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 SYDE1Q6ZW31 735 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-207ENST00000539047 ANKS1BQ7Z6G8 1248 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 DENND1CQ8IV53 801 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 CDKL3Q8IVW4 592 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-207ENST00000539047 LZTR1Q8N653 840 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 LRRN4CLQ8ND94 238 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 ACTL9Q8TC94 416 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 ZNF707Q96C28 371 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-207ENST00000539047 GAS2L1Q99501 681 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-207ENST00000539047 RHOXF2Q9BQY4 288 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 ZYG11BQ9C0D3 744 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 RNF38Q9H0F5 515 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 PRDM12Q9H4Q4 367 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 PCYOX1Q9UHG3 505 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 ZNF148Q9UQR1 794 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 UTP11Q9Y3A2 253 aaKnown RBP15.9■□□□□ 0.14
VAMP1-207ENST00000539047 UNC80Q8N2C7 3258 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 CUL9Q8IWT3 2517 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 CFAP69A5D8W1 941 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 H7C0C1 242 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 DLL1O00548 723 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 NCAM2O15394 837 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 GJA1P17302 382 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 ERCC2P18074 760 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 MX2P20592 715 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 TACR2P21452 398 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 IL4RP24394 825 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 GTF2F1P35269 517 aaKnown RBP eCLIP15.89■□□□□ 0.13
VAMP1-207ENST00000539047 ATP5OP48047 213 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 KCNQ1P51787 676 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 VCPP55072 806 aaKnown RBP15.89■□□□□ 0.13
VAMP1-207ENST00000539047 AUHQ13825 339 aaKnown RBP15.89■□□□□ 0.13
VAMP1-207ENST00000539047 PIK3R6Q5UE93 754 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 TTC39BQ5VTQ0 682 aaPredicted RBP15.89■□□□□ 0.13
VAMP1-207ENST00000539047 NCBP2-AS2Q69YL0 99 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 ANKRD54Q6NXT1 300 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 CMTM8Q8IZV2 173 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 GPR161Q8N6U8 529 aaKnown RBP15.89■□□□□ 0.13
VAMP1-207ENST00000539047 PQLC3Q8N755 202 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 PLD5Q8N7P1 536 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 TTC16Q8NEE8 873 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 VN1R2Q8NFZ6 395 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 ATL2Q8NHH9 583 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 CCHCR1Q8TD31 782 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 RSAD2Q8WXG1 361 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 ATG4AQ8WYN0 398 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 RPRD1AQ96P16 312 aaPredicted RBP15.89■□□□□ 0.13
VAMP1-207ENST00000539047 HERPUD2Q9BSE4 406 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 RETREG1Q9H6L5 497 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 KIF9Q9HAQ2 790 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 ANLNQ9NQW6 1124 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 PPARGC1AQ9UBK2 798 aaKnown RBP15.89■□□□□ 0.13
VAMP1-207ENST00000539047 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.89■□□□□ 0.13
VAMP1-207ENST00000539047 VANGL2Q9ULK5 521 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 ARHGAP26Q9UNA1 814 aa15.89■□□□□ 0.13
VAMP1-207ENST00000539047 R3HDM2Q9Y2K5 976 aaKnown RBP15.89■□□□□ 0.13
VAMP1-207ENST00000539047 V9GYY5 206 aaPredicted RBP15.89■□□□□ 0.13
VAMP1-207ENST00000539047 TARSL2A2RTX5 802 aaKnown RBP15.88■□□□□ 0.13
VAMP1-207ENST00000539047 HACD1B0YJ81 288 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 FAM72CH0Y354 149 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 CTIFO43310 598 aaKnown RBP15.88■□□□□ 0.13
VAMP1-207ENST00000539047 STK10O94804 968 aaKnown RBP15.88■□□□□ 0.13
VAMP1-207ENST00000539047 PAPLNO95428 1278 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 ITGAVP06756 1048 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 RHOQP17081 205 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 FSHRP23945 695 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 HOXC13P31276 330 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 ACTN2P35609 894 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 GGCXP38435 758 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 XRCC4Q13426 336 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 KCNC3Q14003 757 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 PAFAH1B3Q15102 231 aaKnown RBP15.88■□□□□ 0.13
VAMP1-207ENST00000539047 PDK1Q15118 436 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 ERCC6LQ2NKX8 1250 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 PRSS36Q5K4E3 855 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 ADGRF1Q5T601 910 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 FAM72AQ5TYM5 149 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 MANEALQ5VSG8 457 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 FAM72DQ6L9T8 149 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 DARS2Q6PI48 645 aaKnown RBP15.88■□□□□ 0.13
VAMP1-207ENST00000539047 EP400NLQ6ZTU2 488 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 FAM72BQ86X60 149 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 CCDC117Q8IWD4 279 aaPredicted RBP15.88■□□□□ 0.13
VAMP1-207ENST00000539047 LGI2Q8N0V4 545 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 C12orf76Q8N812 135 aaPredicted RBP15.88■□□□□ 0.13
VAMP1-207ENST00000539047 CCDC89Q8N998 374 aa15.88■□□□□ 0.13
VAMP1-207ENST00000539047 NKD2Q969F2 451 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms