RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 HS3ST4Q9Y661 456 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 CLUHO75153 1309 aa14.62□□□□□ -0.07
CD4-208ENST00000538827 DENND4AQ7Z401 1863 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 KCNU1A8MYU2 1149 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 FAM72CH0Y354 149 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 APOL1O14791 398 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 CST8O60676 142 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 TJP3O95049 919 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 SLU7O95391 586 aaKnown RBP14.61□□□□□ -0.07
CD4-208ENST00000538827 PFKLP17858 780 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 KCNA5P22460 613 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 FSHRP23945 695 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 SLC11A2P49281 568 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 ADAM15Q13444 863 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 TFDP2Q14188 446 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 ANKRD20A8PQ5CZ79 823 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 FAM72AQ5TYM5 149 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 FAM72DQ6L9T8 149 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 SYCE2Q6PIF2 218 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 TMEM184AQ6ZMB5 413 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 GPR149Q86SP6 731 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 FAM72BQ86X60 149 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 DENND1CQ8IV53 801 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 LRRN4CLQ8ND94 238 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 WBP2Q969T9 261 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 TBC1D31Q96DN5 1066 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 ZFRQ96KR1 1074 aaKnown RBP14.61□□□□□ -0.07
CD4-208ENST00000538827 RNF157Q96PX1 679 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 HAPLN3Q96S86 360 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 FAM118BQ9BPY3 351 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 SLC46A2Q9BY10 475 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 CWC15Q9P013 229 aaKnown RBP14.61□□□□□ -0.07
CD4-208ENST00000538827 CFAP97Q9P2B7 532 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 OR12D3Q9UGF7 316 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 PRKAG3Q9UGI9 489 aa14.61□□□□□ -0.07
CD4-208ENST00000538827 TTC7AQ9ULT0 858 aaPredicted RBP14.61□□□□□ -0.07
CD4-208ENST00000538827 GOLGA6L7A0A1B0GV03 622 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 F5H5T6 163 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 ACSL4O60488 711 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 LRIG2O94898 1065 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 IL9P15248 144 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 TACR2P21452 398 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 AMPD1P23109 780 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 SLC7A9P82251 487 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 MS4A13Q5J8X5 152 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 TEX35Q5T0J7 233 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 CES5AQ6NT32 575 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 C1orf228Q6PIY5 440 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 LRRC31Q6UY01 552 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 RFX8Q6ZV50 586 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 DDX42Q86XP3 938 aaKnown RBP eCLIP14.6□□□□□ -0.07
CD4-208ENST00000538827 KLHL7Q8IXQ5 586 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 CMTM8Q8IZV2 173 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 FAM71BQ8TC56 605 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 ATG4AQ8WYN0 398 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 TSC1Q92574 1164 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 DCLK3Q9C098 648 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 OSBPL2Q9H1P3 480 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 RBM12Q9NTZ6 932 aaKnown RBP14.6□□□□□ -0.07
CD4-208ENST00000538827 RCOR3Q9P2K3 495 aaPredicted RBP14.6□□□□□ -0.07
CD4-208ENST00000538827 VANGL2Q9ULK5 521 aa14.6□□□□□ -0.07
CD4-208ENST00000538827 ZNF487B1APH4 448 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 E9PAM4 449 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 LEFTY2O00292 366 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 PRAMEF12O95522 483 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 HOXB8P17481 243 aaPredicted RBP14.59□□□□□ -0.07
CD4-208ENST00000538827 EPHB2P29323 1055 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 VCPP55072 806 aaKnown RBP14.59□□□□□ -0.07
CD4-208ENST00000538827 ADCY2Q08462 1091 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 SEMA3BQ13214 749 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 MTA1Q13330 715 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 SNX1Q13596 522 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 TAZQ16635 292 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 NADSYN1Q6IA69 706 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 NPNTQ6UXI9 565 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 BBS12Q6ZW61 710 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 C14orf80Q86SX3 495 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 VSIG1Q86XK7 387 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 LGI2Q8N0V4 545 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 SPATA4Q8NEY3 305 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 PCDH19Q8TAB3 1148 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 SH3RF2Q8TEC5 729 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 C1orf54Q8WWF1 131 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 FAF2Q96CS3 445 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 RPRD1AQ96P16 312 aaPredicted RBP14.59□□□□□ -0.07
CD4-208ENST00000538827 PHOX2BQ99453 314 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 ARHGEF4Q9NR80 690 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 CLEC1BQ9P126 229 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 STIM2Q9P246 746 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 ARHGAP26Q9UNA1 814 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 R3HDM2Q9Y2K5 976 aaKnown RBP14.59□□□□□ -0.07
CD4-208ENST00000538827 MFHAS1Q9Y4C4 1052 aa14.59□□□□□ -0.07
CD4-208ENST00000538827 DOCK4Q8N1I0 1966 aa14.58□□□□□ -0.07
CD4-208ENST00000538827 TRDMT1O14717 391 aaKnown RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 MFSD11O43934 449 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 PHF2O75151 1096 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 PECAM1P16284 738 aaPredicted RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 ZFXP17010 805 aaPredicted RBP14.58□□□□□ -0.08
CD4-208ENST00000538827 ERCC2P18074 760 aa14.58□□□□□ -0.08
CD4-208ENST00000538827 ZNF135P52742 658 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms