RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 GPRASP2Q96D09 838 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 HPDLQ96IR7 371 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 VAT1Q99536 393 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 MUC3BQ9H195 1237 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 PFDN2Q9UHV9 154 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 TNFRSF21O75509 655 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 NPM3O75607 178 aaKnown RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 PROCP04070 461 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 CNPP09543 421 aaKnown RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 PAICSP22234 425 aaKnown RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 MZF1P28698 734 aaPredicted RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 SLC16A1P53985 500 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 HIRAP54198 1017 aaPredicted RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 COPZ1P61923 177 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 IFI35P80217 286 aaPredicted RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 ENPEPQ07075 957 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 BLMHQ13867 455 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 CIAPIN1Q6FI81 312 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 NEK5Q6P3R8 708 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 EMC1Q8N766 993 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 TSEN2Q8NCE0 465 aaKnown RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 PIWIL2Q8TC59 973 aaKnown RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 PNPT1Q8TCS8 783 aaKnown RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 PROX1Q92786 737 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 ART4Q93070 314 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 SKA1Q96BD8 255 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 RNF145Q96MT1 663 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 FAM118BQ9BPY3 351 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 EMILIN2Q9BXX0 1053 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 RIBC2Q9H4K1 309 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 WDCPQ9H6R7 721 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 LRRC4BQ9NT99 713 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 GIN1Q9NXP7 522 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 PTTG2Q9NZH5 202 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 SLAIN2Q9P270 581 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 TSR3Q9UJK0 312 aaKnown RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 TMA7Q9Y2S6 64 aaKnown RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 ARAP3Q8WWN8 1544 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 LINC00854A0A1B0GVQ3 168 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 FAM205CA6NFA0 338 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 HPCAL1P37235 193 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 SMIM11AP58511 58 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 ST8SIA6P61647 398 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 ZNF268Q14587 947 aaPredicted RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 PRR5LQ6MZQ0 368 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 GJB7Q6PEY0 223 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 BNIPLQ7Z465 357 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 MCOLN2Q8IZK6 566 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 CCDC185Q8N715 623 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 BTBD9Q96Q07 612 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 PDCD10Q9BUL8 212 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 LRPAP1P30533 357 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 RPL22P35268 128 aaKnown RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 GNL1P36915 607 aaPredicted RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 NAMPTP43490 491 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 TUBA3CQ13748 450 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 ZC2HC1CQ53FD0 456 aaPredicted RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 SGO1Q5FBB7 561 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 INTS11Q5TA45 600 aaKnown RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 PEG10Q86TG7 708 aaKnown RBP7.07□□□□□ -1.28
SORT1-209ENST00000538502 SUN5Q8TC36 379 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 ANKRD49Q8WVL7 239 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 TRPM5Q9NZQ8 1165 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 LIMD1Q9UGP4 676 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 ITGA11Q9UKX5 1188 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 TFR2Q9UP52 801 aa7.07□□□□□ -1.28
SORT1-209ENST00000538502 CEP152O94986 1710 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 COL15A1P39059 1388 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 ASTN2O75129 1339 aaPredicted RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 ERI2A8K979 691 aaKnown RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 AP5Z1O43299 807 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 GUCY1B2O75343 617 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 FESP07332 822 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 CLTBP09497 229 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 ITGAXP20702 1163 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 KPNA1P52294 538 aaPredicted RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 BCAT1P54687 386 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 GMFBP60983 142 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 PHKG1Q16816 387 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 LMBRD2Q68DH5 695 aaPredicted RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 LIN54Q6MZP7 749 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 NAT14Q8WUY8 206 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 NUDT12Q9BQG2 462 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 TMEM121Q9BTD3 319 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 KIFC1Q9BW19 673 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 EHD1Q9H4M9 534 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 ENTPD7Q9NQZ7 604 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 VPS45Q9NRW7 570 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 BCLAF3A2AJT9 711 aaKnown RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 UGT2B11O75310 529 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 RPS6KA4O75676 772 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 SNRPB2P08579 225 aaKnown RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 CPB1P15086 417 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 SMAD1Q15797 465 aaKnown RBP7.06□□□□□ -1.28
SORT1-209ENST00000538502 SH3BP5LQ7L8J4 393 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 EEPD1Q7L9B9 569 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 KCNMB4Q86W47 210 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 COLGALT1Q8NBJ5 622 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 ETNPPLQ8TBG4 499 aa7.06□□□□□ -1.28
SORT1-209ENST00000538502 UTP15Q8TED0 518 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms