RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 MAP2K2P36507 400 aa25.61■■□□□ 1.69
RAB40C-204ENST00000538492 PURAQ00577 322 aaKnown RBP25.61■■□□□ 1.69
RAB40C-204ENST00000538492 STEAP4Q687X5 459 aa25.61■■□□□ 1.69
RAB40C-204ENST00000538492 PID1Q7Z2X4 250 aa25.61■■□□□ 1.69
RAB40C-204ENST00000538492 PCED1BQ96HM7 432 aa25.61■■□□□ 1.69
RAB40C-204ENST00000538492 FERMT1Q9BQL6 677 aa25.61■■□□□ 1.69
RAB40C-204ENST00000538492 KATNAL1Q9BW62 490 aa25.61■■□□□ 1.69
RAB40C-204ENST00000538492 MKS1Q9NXB0 559 aa25.61■■□□□ 1.69
RAB40C-204ENST00000538492 PSAT1Q9Y617 370 aa25.61■■□□□ 1.69
RAB40C-204ENST00000538492 TSC2P49815 1807 aa25.61■■□□□ 1.69
RAB40C-204ENST00000538492 TRAFD1O14545 582 aaPredicted RBP25.6■■□□□ 1.69
RAB40C-204ENST00000538492 PPP1R12AO14974 1030 aaPredicted RBP25.6■■□□□ 1.69
RAB40C-204ENST00000538492 USP17L7P0C7H9 530 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 CRYMQ14894 314 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 ZCCHC23Q6ZST2 131 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 ARID3BQ8IVW6 561 aaPredicted RBP25.6■■□□□ 1.69
RAB40C-204ENST00000538492 STKLD1Q8NE28 680 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 AGAP3Q96P47 875 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 MIPEPQ99797 713 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 SMOQ99835 787 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 NOP53Q9NZM5 478 aaKnown RBP25.6■■□□□ 1.69
RAB40C-204ENST00000538492 SIRPGQ9P1W8 387 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 LNPEPQ9UIQ6 1025 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 ALDH1A2O94788 518 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 CTSHP09668 335 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 NCAM1P13591 858 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 ADRA1BP35368 520 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 IFRD2Q12894 506 aaPredicted RBP25.6■■□□□ 1.69
RAB40C-204ENST00000538492 GPR162Q16538 588 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 ATG16L1Q676U5 607 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 ALYREFQ86V81 257 aaKnown RBP25.6■■□□□ 1.69
RAB40C-204ENST00000538492 SYT15Q9BQS2 421 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 ARMCX1Q9P291 453 aa25.6■■□□□ 1.69
RAB40C-204ENST00000538492 MYADML2A6NDP7 307 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 DCLK1O15075 740 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 IL1BP01584 269 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 GNAT1P11488 350 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 ERCC2P18074 760 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 PAFAH1B3Q15102 231 aaKnown RBP25.59■■□□□ 1.69
RAB40C-204ENST00000538492 FAM35AQ86V20 835 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 C3orf58Q8NDZ4 430 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 TACO1Q9BSH4 297 aaKnown RBP25.59■■□□□ 1.69
RAB40C-204ENST00000538492 RHOBTB2Q9BYZ6 727 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 C20orf27Q9GZN8 174 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 MIOSQ9NXC5 875 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 CDY2AQ9Y6F7 541 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 USP12O75317 370 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 GM2AP17900 193 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 DAOAP59103 153 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 NIPAL4Q0D2K0 466 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 C16orf46Q6P387 395 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 TRIM42Q8IWZ5 723 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 NSMCE1Q8WV22 266 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 PTCD3Q96EY7 689 aaKnown RBP25.59■■□□□ 1.69
RAB40C-204ENST00000538492 WDR6Q9NNW5 1121 aaKnown RBP25.59■■□□□ 1.69
RAB40C-204ENST00000538492 EIF2B3Q9NR50 452 aaKnown RBP25.59■■□□□ 1.69
RAB40C-204ENST00000538492 KLHL8Q9P2G9 620 aaPredicted RBP25.59■■□□□ 1.69
RAB40C-204ENST00000538492 NKX1-2Q9UD57 310 aaPredicted RBP25.59■■□□□ 1.69
RAB40C-204ENST00000538492 ST3GAL5Q9UNP4 418 aa25.59■■□□□ 1.69
RAB40C-204ENST00000538492 DNAJC6O75061 913 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 ALDOAP04075 364 aaKnown RBP25.58■■□□□ 1.69
RAB40C-204ENST00000538492 PGAM1P18669 254 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 PACS1Q6VY07 963 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 MARK2Q7KZI7 788 aaKnown RBP25.58■■□□□ 1.69
RAB40C-204ENST00000538492 ZMIZ2Q8NF64 920 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 C7orf26Q96N11 449 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 FAM105AQ9NUU6 356 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 TPP1O14773 563 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 DIAPH2O60879 1101 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 BPGMP07738 259 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 C6orf222P0C671 652 aaPredicted RBP25.58■■□□□ 1.69
RAB40C-204ENST00000538492 OCRLQ01968 901 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 TEX44Q53QW1 395 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 CYS1Q717R9 158 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 EDEM1Q92611 657 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 CDKL2Q92772 493 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 PAAF1Q9BRP4 392 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 NMUR2Q9GZQ4 415 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 XPNPEP3Q9NQH7 507 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 C15orf41Q9Y2V0 281 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 BRCA2P51587 3418 aa25.58■■□□□ 1.69
RAB40C-204ENST00000538492 NUP205Q92621 2012 aa25.58■■□□□ 1.68
RAB40C-204ENST00000538492 FCHO1O14526 889 aa25.57■■□□□ 1.68
RAB40C-204ENST00000538492 TAF1CQ15572 869 aaPredicted RBP25.57■■□□□ 1.68
RAB40C-204ENST00000538492 DSTYKQ6XUX3 929 aa25.57■■□□□ 1.68
RAB40C-204ENST00000538492 NSL1Q96IY1 281 aa25.57■■□□□ 1.68
RAB40C-204ENST00000538492 DDIT4Q9NX09 232 aa25.57■■□□□ 1.68
RAB40C-204ENST00000538492 SF3B1O75533 1304 aaKnown RBP eCLIP25.57■■□□□ 1.681e-6■■■■■ 94.1
RAB40C-204ENST00000538492 CASTOR2A6NHX0 329 aa25.57■■□□□ 1.68
RAB40C-204ENST00000538492 WFS1O76024 890 aa25.57■■□□□ 1.68
RAB40C-204ENST00000538492 THP07101 528 aa25.57■■□□□ 1.68
RAB40C-204ENST00000538492 ERVK-10P10266 1014 aa25.57■■□□□ 1.68
RAB40C-204ENST00000538492 TPI1P60174 286 aa25.57■■□□□ 1.68
RAB40C-204ENST00000538492 MRPS6P82932 125 aaKnown RBP25.57■■□□□ 1.68
RAB40C-204ENST00000538492 HSF5Q4G112 596 aaPredicted RBP25.57■■□□□ 1.68
RAB40C-204ENST00000538492 TIFABQ6ZNK6 161 aa25.57■■□□□ 1.68
RAB40C-204ENST00000538492 OR52K1Q8NGK4 314 aa25.57■■□□□ 1.68
RAB40C-204ENST00000538492 CADM1Q9BY67 442 aaKnown RBP25.57■■□□□ 1.68
RAB40C-204ENST00000538492 PRDM16Q9HAZ2 1276 aa25.57■■□□□ 1.68
RAB40C-204ENST00000538492 SNX10Q9Y5X0 201 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms