RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ANKRD52Q8NB46 1076 aa14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 SLC39A7Q92504 469 aa14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 GOLGA1Q92805 767 aa14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 SEMA4DQ92854 862 aa14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 CNDP2Q96KP4 475 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 IPO9Q96P70 1041 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 UBXN6Q9BZV1 441 aa14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 PABPC3Q9H361 631 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 TMEM8AQ9HCN3 771 aa14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 AASDHPPTQ9NRN7 309 aa14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 SERGEFQ9UGK8 458 aa14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 MAPK8IP1Q9UQF2 711 aa14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 TRAF3IP3Q9Y228 551 aa14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 NCKAP1Q9Y2A7 1128 aa14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 HBS1LQ9Y450 684 aaKnown RBP14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 AK5Q9Y6K8 562 aa14.59□□□□□ -0.07
SMARCA4-206ENST00000538456 E9PAM4 449 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 K7ELQ4 463 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 MAPK13O15264 365 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 TLX3O43711 291 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 DFNA5O60443 496 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 TBL1XO60907 577 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 RFPL3O75679 317 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 C1QL1O75973 258 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 LDOC1O95751 146 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 POLR2EP19388 210 aaKnown RBP14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 ZNF445P59923 1031 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 PDE4CQ08493 712 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 ARHGAP17Q68EM7 881 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 PM20D1Q6GTS8 502 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 NCEH1Q6PIU2 408 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 TATDN2Q93075 761 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 ELF4Q99607 663 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 RSPH9Q9H1X1 276 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 LRRC4Q9HBW1 653 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 FBXL12Q9NXK8 326 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 STOML2Q9UJZ1 356 aa14.58□□□□□ -0.08
SMARCA4-206ENST00000538456 GOLGA6L7A0A1B0GV03 622 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 A0A1W2PP55 124 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 A0A1W2PPC4 97 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 YJEFN3A6XGL0 299 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 E7ENQ6 273 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 MID1O15344 667 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 PAPSS1O43252 624 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 SIN3BO75182 1162 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 WNT1P04628 370 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 ITGAVP06756 1048 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 C7P10643 843 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 EIF2S3P41091 472 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 GALCP54803 685 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 SHBQ15464 509 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 HES3Q5TGS1 186 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 BSPRYQ5W0U4 402 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 KRT39Q6A163 491 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 LRRC69Q6ZNQ3 347 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 USP30Q70CQ3 517 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 KIAA0907Q7Z7F0 614 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 DHX40Q8IX18 779 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 SIX6OS1Q8N1H7 587 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 EID2Q8N6I1 236 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 EEF2KMTQ96G04 330 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 EBF2Q9HAK2 575 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 STIM2Q9P246 746 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 SUN2Q9UH99 717 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 TSPAN16Q9UKR8 245 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 PCDHGA1Q9Y5H4 931 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 RAI2Q9Y5P3 530 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 CFAP46Q8IYW2 2715 aa14.57□□□□□ -0.08
SMARCA4-206ENST00000538456 WNT9AO14904 365 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 XPO1O14980 1071 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 ATXN7O15265 892 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 RNASEH1O60930 286 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 RNASEH2AO75792 299 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 SLC6A4P31645 630 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 PSMC2P35998 433 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 ACADVLP49748 655 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 MXI1P50539 228 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 ST8SIA6P61647 398 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 TARDBPQ13148 414 aaKnown RBP eCLIP14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 CST6Q15828 149 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 MMAAQ8IVH4 418 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 MFN1Q8IWA4 741 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 TTC39CQ8N584 583 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 UBA3Q8TBC4 463 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 SAP25Q8TEE9 199 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 COL26A1Q96A83 441 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 SKA1Q96BD8 255 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 FCRL3Q96P31 734 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 NEUROG2Q9H2A3 272 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 PRORYQ9H606 182 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 HESX1Q9UBX0 185 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 ZNF462Q96JM2 2506 aa14.56□□□□□ -0.08
SMARCA4-206ENST00000538456 MGAQ8IWI9 3026 aa14.55□□□□□ -0.08
SMARCA4-206ENST00000538456 A0A1B0GVL5 298 aa14.55□□□□□ -0.08
SMARCA4-206ENST00000538456 LRRC72A6NJI9 287 aa14.55□□□□□ -0.08
SMARCA4-206ENST00000538456 RRP8O43159 456 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-206ENST00000538456 LATS1O95835 1130 aa14.55□□□□□ -0.08
SMARCA4-206ENST00000538456 F13A1P00488 732 aa14.55□□□□□ -0.08
SMARCA4-206ENST00000538456 PRR29P0C7W0 189 aa14.55□□□□□ -0.08
SMARCA4-206ENST00000538456 ZSCAN22P10073 491 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms