RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 NLRC5Q86WI3 1866 aa4.6□□□□□ -1.67
SNHG1-208ENST00000538266 TCRBV5S2A0A599 114 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 LRRIQ3A6PVS8 624 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-208ENST00000538266 NT5C1B-RDH14C9J2C7 533 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 C5orf67F2Z3F1 127 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 TMEM189-UBE2V1I3L0A0 370 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 PODXLO00592 558 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 NRP1O14786 923 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 OPA1O60313 960 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 B4GALT3O60512 393 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 LPXNO60711 386 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 CSPG5O95196 566 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 ITGB3P05106 788 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 URODP06132 367 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 RB1P06400 928 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 CKMP06732 381 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 GALTP07902 379 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 MED14OSP0DP75 135 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 ODC1P11926 461 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 P4HA1P13674 534 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 ATF2P15336 505 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 KRT15P19012 456 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 TRIM21P19474 475 aaKnown RBP4.59□□□□□ -1.67
SNHG1-208ENST00000538266 PAX3P23760 479 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 EEF1GP26641 437 aaKnown RBP4.59□□□□□ -1.67
SNHG1-208ENST00000538266 LRPAP1P30533 357 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 GTF2H1P32780 548 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 TAF6P49848 677 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 CLCNKBP51801 687 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 ZNF75DP51815 510 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 GUCY2FP51841 1108 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 ERVK-21P61565 698 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 TNNC1P63316 161 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 MYL7Q01449 175 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 UBE3AQ05086 875 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 PTPRJQ12913 1337 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 ZBTB6Q15916 424 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 MAN2A1Q16706 1144 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 PTPROQ16827 1216 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 UPP1Q16831 310 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 ZNF699Q32M78 642 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 TCP11X2Q5H9J9 407 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 EMC4Q5J8M3 183 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 HABP4Q5JVS0 413 aaKnown RBP4.59□□□□□ -1.67
SNHG1-208ENST00000538266 FKBP15Q5T1M5 1219 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 C9orf57Q5W0N0 161 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 KRT39Q6A163 491 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 SDE2Q6IQ49 451 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 FUT10Q6P4F1 479 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 DCLRE1AQ6PJP8 1040 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 CD300LDQ6UXZ3 194 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 ETV3LQ6ZN32 361 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 TRAPPC11Q7Z392 1133 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 LUZP1Q86V48 1076 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 CEP57Q86XR8 500 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 TRIM48Q8IWZ4 208 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 VPS52Q8N1B4 723 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 SLC39A11Q8N1S5 342 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 LRRC52Q8N7C0 313 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 FBXL13Q8NEE6 735 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 OR5B17Q8NGF7 314 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 PHOSPHO1Q8TCT1 267 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 HASPINQ8TF76 798 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 RABGGTAQ92696 567 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 PPP2R3CQ969Q6 453 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 SLC35C1Q96A29 364 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 IGSF21Q96ID5 467 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 HPDLQ96IR7 371 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 SIGLEC10Q96LC7 697 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 MED15Q96RN5 788 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 TUBGCP2Q9BSJ2 902 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 C17orf80Q9BSJ5 609 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 YIPF4Q9BSR8 244 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 KIAA1671Q9BY89 1806 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 DNAI2Q9GZS0 605 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 RNF38Q9H0F5 515 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 CXCL16Q9H2A7 254 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 CWH43Q9H720 699 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 CERS4Q9HA82 394 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 TMEM8AQ9HCN3 771 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 ENTPD7Q9NQZ7 604 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 TLR9Q9NR96 1032 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 SAMSN1Q9NSI8 373 aaKnown RBP4.59□□□□□ -1.67
SNHG1-208ENST00000538266 MIOSQ9NXC5 875 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 CNOT6Q9ULM6 557 aaKnown RBP4.59□□□□□ -1.67
SNHG1-208ENST00000538266 AGAP1Q9UPQ3 857 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 LZTS1Q9Y250 596 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 COQ6Q9Y2Z9 468 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 PCDHB4Q9Y5E5 795 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 IRAK3Q9Y616 596 aa4.59□□□□□ -1.67
SNHG1-208ENST00000538266 TRIP11Q15643 1979 aa4.58□□□□□ -1.68
SNHG1-208ENST00000538266 ANO9A1A5B4 782 aa4.58□□□□□ -1.68
SNHG1-208ENST00000538266 CCDC66A2RUB6 948 aa4.58□□□□□ -1.68
SNHG1-208ENST00000538266 KPNA7A9QM74 516 aa4.58□□□□□ -1.68
SNHG1-208ENST00000538266 NPIPB6E9PJ23 425 aa4.58□□□□□ -1.68
SNHG1-208ENST00000538266 H3BNC9 293 aa4.58□□□□□ -1.68
SNHG1-208ENST00000538266 P4HA2O15460 535 aa4.58□□□□□ -1.68
SNHG1-208ENST00000538266 HUS1O60921 280 aa4.58□□□□□ -1.68
SNHG1-208ENST00000538266 DNAJC8O75937 253 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-208ENST00000538266 TSPAN15O95858 294 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms