RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 CCDC33Q8N5R6 958 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 OR10T2Q8NGX3 314 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 FAM210AQ96ND0 272 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 TMEM237Q96Q45 408 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 CCDC77Q9BR77 488 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 ETNK1Q9HBU6 452 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 ANLNQ9NQW6 1124 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 DTLQ9NZJ0 730 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 PAK5Q9P286 719 aa11.09□□□□□ -0.63
CLIP1-210ENST00000538120 NKX1-2Q9UD57 310 aaPredicted RBP11.09□□□□□ -0.63
CLIP1-210ENST00000538120 SYNJ2BP-COX16A0A087WUM0 186 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 CFAP69A5D8W1 941 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 MOXD2PA6NHM9 499 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 DGKIO75912 1065 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 SKIP12755 728 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 ZFXP17010 805 aaPredicted RBP11.08□□□□□ -0.64
CLIP1-210ENST00000538120 HOXD10P28358 340 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 WDR4P57081 412 aaKnown RBP11.08□□□□□ -0.64
CLIP1-210ENST00000538120 INTS6LQ5JSJ4 861 aaKnown RBP11.08□□□□□ -0.64
CLIP1-210ENST00000538120 SYCP2LQ5T4T6 812 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 VPS37BQ9H9H4 285 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 WDR6Q9NNW5 1121 aaKnown RBP11.08□□□□□ -0.64
CLIP1-210ENST00000538120 CNGB3Q9NQW8 809 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 COX16Q9P0S2 106 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 RCOR3Q9P2K3 495 aaPredicted RBP11.08□□□□□ -0.64
CLIP1-210ENST00000538120 EXOC1LA0A1B0GW35 172 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 CHADO15335 359 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 SPAG7O75391 227 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 ZBED1O96006 694 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 SSTR1P30872 391 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 NR2C2P49116 596 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 FAM189BP81408 668 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 DEUP1Q05D60 604 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 NME3Q13232 169 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 SLC45A4Q5BKX6 768 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 ANKRD20A2Q5SQ80 823 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 ANKRD20A1Q5TYW2 823 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 ANKRD20A3Q5VUR7 823 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 EGFLAMQ63HQ2 1017 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 DCLRE1AQ6PJP8 1040 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 KCNT2Q6UVM3 1135 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 LAPTM4BQ86VI4 370 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 ZNF280BQ86YH2 543 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 CDKL3Q8IVW4 592 aaPredicted RBP11.08□□□□□ -0.64
CLIP1-210ENST00000538120 GBP7Q8N8V2 638 aaPredicted RBP11.08□□□□□ -0.64
CLIP1-210ENST00000538120 FBXO36Q8NEA4 188 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 CCDC110Q8TBZ0 833 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 ADAM32Q8TC27 787 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 RAET1EQ8TD07 263 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 PYROXD1Q8WU10 500 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 SPDL1Q96EA4 605 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 SMARCD1Q96GM5 515 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 MAGEB18Q96M61 343 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 GLT1D1Q96MS3 346 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 UROC1Q96N76 676 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 OLFM3Q96PB7 478 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 QKIQ96PU8 341 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLIP1-210ENST00000538120 TSEN34Q9BSV6 310 aaKnown RBP11.08□□□□□ -0.64
CLIP1-210ENST00000538120 MYLK2Q9H1R3 596 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 KIF9Q9HAQ2 790 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 SLCO1B3Q9NPD5 702 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 ARHGEF4Q9NR80 690 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 RAB6BQ9NRW1 208 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 KLHL14Q9P2G3 628 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 FBXO9Q9UK97 447 aaPredicted RBP11.08□□□□□ -0.64
CLIP1-210ENST00000538120 STAP1Q9ULZ2 295 aa11.08□□□□□ -0.64
CLIP1-210ENST00000538120 TSC2P49815 1807 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 A0A1W2PQ45 241 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-210ENST00000538120 A0A1W2PQY0 241 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 DDHD2O94830 711 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 UNC5CO95185 931 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 INHAP05111 366 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 YY1P25490 414 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 ATP5DP30049 168 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 MAGEA6P43360 314 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 CCNHP51946 323 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-210ENST00000538120 DNAJC3Q13217 504 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 MTFR1Q15390 333 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 BBS9Q3SYG4 887 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 EFHC2Q5JST6 749 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 CLLU1OSQ5K130 101 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 FAXCQ5TGI0 409 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 METTL23Q86XA0 190 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 RIBC1Q8N443 379 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-210ENST00000538120 SLC7A14Q8TBB6 771 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 RNF139Q8WU17 664 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 ZFRQ96KR1 1074 aaKnown RBP11.07□□□□□ -0.64
CLIP1-210ENST00000538120 SUSD3Q96L08 255 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 FAM167BQ9BTA0 163 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 PITPNM3Q9BZ71 974 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 NR2E3Q9Y5X4 410 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 CEP350Q5VT06 3117 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 RASA4BC9J798 803 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 POC1B-GALNT4F8VUJ3 575 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 FAM72CH0Y354 149 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 RASA4O43374 803 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 AVILO75366 819 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 GCATO75600 419 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 METTL18O95568 372 aa11.07□□□□□ -0.64
CLIP1-210ENST00000538120 CCNB1P14635 433 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms