RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 FAM133BQ5BKY9 247 aaKnown RBP17.98■□□□□ 0.47
SNX17-210ENST00000537606 GPR152Q8TDT2 470 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 CYTH2Q99418 400 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 USP15Q9Y4E8 981 aaPredicted RBP17.98■□□□□ 0.47
SNX17-210ENST00000537606 LAMA2P24043 3122 aaKnown RBP17.98■□□□□ 0.47
SNX17-210ENST00000537606 LRIG2O94898 1065 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 F9P00740 461 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 SELPP16109 830 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 PSMB4P28070 264 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 PBX3P40426 434 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 SCAPQ12770 1279 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 NR1H3Q13133 447 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 DNAJC3Q13217 504 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 OLIG2Q13516 323 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 CTAGE3PQ8IX95 158 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 ZNF567Q8N184 647 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 SLAIN1Q8ND83 568 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 IRGQQ8WZA9 623 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 DHRS4Q9BTZ2 278 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 SLCO1B3Q9NPD5 702 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 CXorf49A8MYA2 514 aaPredicted RBP17.97■□□□□ 0.47
SNX17-210ENST00000537606 ENPP3O14638 875 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 ARPP19P56211 112 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 IL9RQ01113 521 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 SPARCL1Q14515 664 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 C4orf50Q6ZRC1 276 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 TRPM8Q7Z2W7 1104 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 PID1Q7Z2X4 250 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 SGSM3Q96HU1 749 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 CELF6Q96J87 481 aaKnown RBP17.97■□□□□ 0.47
SNX17-210ENST00000537606 NMUR1Q9HB89 426 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 FRMPD3Q5JV73 1810 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 NT5C1B-RDH14C9J2C7 533 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 TNFRSF10BO14763 440 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 PPP1R12AO14974 1030 aaPredicted RBP17.97■□□□□ 0.47
SNX17-210ENST00000537606 PRPF4O43172 522 aaKnown RBP eCLIP17.97■□□□□ 0.47
SNX17-210ENST00000537606 TYROBPO43914 113 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 SEMA5AQ13591 1074 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 SMAD1Q15797 465 aaKnown RBP17.97■□□□□ 0.47
SNX17-210ENST00000537606 TCTN1Q2MV58 587 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 BTBD8Q5XKL5 378 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 RWDD4Q6NW29 188 aaKnown RBP17.97■□□□□ 0.47
SNX17-210ENST00000537606 SPATA21Q7Z572 469 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 SCD5Q86SK9 330 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 ABI1Q8IZP0 508 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 TTC9BQ8N6N2 239 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 PPM1NQ8N819 430 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 MCUQ8NE86 351 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 SIGLEC10Q96LC7 697 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 UNC93B1Q9H1C4 597 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 KDM4CQ9H3R0 1056 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 TTLL3Q9Y4R7 772 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 TRIM17Q9Y577 477 aa17.97■□□□□ 0.47
SNX17-210ENST00000537606 FKTNO75072 461 aa17.96■□□□□ 0.47
SNX17-210ENST00000537606 SOAT2O75908 522 aa17.96■□□□□ 0.47
SNX17-210ENST00000537606 GLUD2P49448 558 aa17.96■□□□□ 0.47
SNX17-210ENST00000537606 APLP1P51693 650 aa17.96■□□□□ 0.47
SNX17-210ENST00000537606 AIF1P55008 147 aa17.96■□□□□ 0.47
SNX17-210ENST00000537606 FAAP100Q0VG06 881 aa17.96■□□□□ 0.47
SNX17-210ENST00000537606 LACTB2Q53H82 288 aaPredicted RBP17.96■□□□□ 0.47
SNX17-210ENST00000537606 TRMT10BQ6PF06 316 aaKnown RBP17.96■□□□□ 0.47
SNX17-210ENST00000537606 UNC5AQ6ZN44 842 aa17.96■□□□□ 0.47
SNX17-210ENST00000537606 ATAD1Q8NBU5 361 aa17.96■□□□□ 0.47
SNX17-210ENST00000537606 MZB1Q8WU39 189 aa17.96■□□□□ 0.47
SNX17-210ENST00000537606 CASP10Q92851 521 aa17.96■□□□□ 0.47
SNX17-210ENST00000537606 AGAP3Q96P47 875 aa17.96■□□□□ 0.47
SNX17-210ENST00000537606 RRN3Q9NYV6 651 aa17.96■□□□□ 0.47
SNX17-210ENST00000537606 NLRC5Q86WI3 1866 aa17.96■□□□□ 0.47
SNX17-210ENST00000537606 UGT1A9O60656 530 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 TPSB2P20231 275 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 SESN2P58004 480 aaPredicted RBP17.96■□□□□ 0.46
SNX17-210ENST00000537606 TPSAB1Q15661 275 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 VARS2Q5ST30 1063 aaKnown RBP17.96■□□□□ 0.46
SNX17-210ENST00000537606 FAM171A1Q5VUB5 890 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 C4orf22Q6V702 233 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.96■□□□□ 0.46
SNX17-210ENST00000537606 GPR62Q9BZJ7 368 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.96■□□□□ 0.46
SNX17-210ENST00000537606 UGT1A7Q9HAW7 530 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 UGT1A10Q9HAW8 530 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 UGT1A8Q9HAW9 530 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 SMYD2Q9NRG4 433 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 HAUS2Q9NVX0 235 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 OSER1Q9NX31 292 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 TMEM161AQ9NX61 479 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 PHF24Q9UPV7 400 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 PCDHB7Q9Y5E2 793 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 IKBKGQ9Y6K9 419 aa17.96■□□□□ 0.46
SNX17-210ENST00000537606 A0A1W2PQH9 124 aa17.95■□□□□ 0.46
SNX17-210ENST00000537606 ARHGEF37A1IGU5 675 aa17.95■□□□□ 0.46
SNX17-210ENST00000537606 WDR91A4D1P6 747 aa17.95■□□□□ 0.46
SNX17-210ENST00000537606 PQBP1O60828 265 aaKnown RBP17.95■□□□□ 0.46
SNX17-210ENST00000537606 STK10O94804 968 aaKnown RBP17.95■□□□□ 0.46
SNX17-210ENST00000537606 OAZ2O95190 189 aa17.95■□□□□ 0.46
SNX17-210ENST00000537606 INHBAP08476 426 aa17.95■□□□□ 0.46
SNX17-210ENST00000537606 MAGEA3P43357 314 aa17.95■□□□□ 0.46
SNX17-210ENST00000537606 CASC4Q6P4E1 433 aa17.95■□□□□ 0.46
SNX17-210ENST00000537606 FAM126BQ8IXS8 530 aa17.95■□□□□ 0.46
SNX17-210ENST00000537606 UNC5BQ8IZJ1 945 aa17.95■□□□□ 0.46
SNX17-210ENST00000537606 SCLYQ96I15 445 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms