RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 RGS13O14921 159 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 TMCC2O75069 709 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 ABCB1P08183 1280 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 CCNA2P20248 432 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 HOXA13P31271 388 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 PTK7Q13308 1070 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 DPYSQ14117 519 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 GK3PQ14409 553 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 CTAGE3PQ8IX95 158 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 SLFN12Q8IYM2 578 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 CADM3Q8N126 398 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 ZNF564Q8TBZ8 553 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 NRBF2Q96F24 287 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 AGPAT1Q99943 283 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 INO80BQ9C086 356 aaPredicted RBP11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 BLOC1S4Q9NUP1 217 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 TMEM9Q9P0T7 183 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 SHANK3Q9BYB0 1731 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 A0A1W2PPW3 197 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 USP37Q86T82 979 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 ZDHHC14Q8IZN3 488 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 LSMEM2Q8N112 164 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 ADAMTS16Q8TE57 1224 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 CDH19Q9H159 772 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 NOL6Q9H6R4 1146 aaKnown RBP11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 RMND5AQ9H871 391 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 CHST7Q9NS84 486 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 THAP1Q9NVV9 213 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 WBP1LQ9NX94 342 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 SRRDQ9UH36 339 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 SLC45A1Q9Y2W3 748 aa11.16□□□□□ -0.62
CLSTN3-207ENST00000537408 E9PMD0 336 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 MYL3P08590 195 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 NR4A1P22736 598 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 DSG3P32926 999 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 NDST2P52849 883 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 GJB7Q6PEY0 223 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 PALM2Q8IXS6 379 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 DAGLBQ8NCG7 672 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 PAFAH2Q99487 392 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 APBA2Q99767 749 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 HERC2P3Q9BVR0 1158 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 IRF2BPLQ9H1B7 796 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 MARCOQ9UEW3 520 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 FETUBQ9UGM5 382 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 CNOT11Q9UKZ1 510 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 GTPBP10A4D1E9 387 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 IVDP26440 423 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 GNA12Q03113 381 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 LSM12Q3MHD2 195 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 TTBK2Q6IQ55 1244 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 DCP2Q8IU60 420 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 TP63Q9H3D4 680 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 RPF2Q9H7B2 306 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 GDAP2Q9NXN4 497 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 PTBP2Q9UKA9 531 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 DSEQ9UL01 958 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 CLDN25C9JDP6 229 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 H0YJX3 145 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 INHBAP08476 426 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 CPOXP36551 454 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 MRPS22P82650 360 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 STX3Q13277 289 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 SIX1Q15475 284 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 QRICH1Q2TAL8 776 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 EFHC2Q5JST6 749 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 NXNQ6DKJ4 435 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 C16orf89Q6UX73 402 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 NUDCD3Q8IVD9 361 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 ADGRF4Q8IZF3 695 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 ZNF786Q8N393 782 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 EXD1Q8NHP7 514 aa11.15□□□□□ -0.62
CLSTN3-207ENST00000537408 KDM3AQ9Y4C1 1321 aa11.15□□□□□ -0.63
CLSTN3-207ENST00000537408 EVPLLA8MZ36 301 aa11.15□□□□□ -0.63
CLSTN3-207ENST00000537408 SLC16A3O15427 465 aaKnown RBP11.15□□□□□ -0.63
CLSTN3-207ENST00000537408 GCAP28676 217 aa11.15□□□□□ -0.63
CLSTN3-207ENST00000537408 PEX3P56589 373 aa11.15□□□□□ -0.63
CLSTN3-207ENST00000537408 MAP3K7CLP57077 242 aa11.15□□□□□ -0.63
CLSTN3-207ENST00000537408 SMU1Q2TAY7 513 aa11.15□□□□□ -0.63
CLSTN3-207ENST00000537408 IGFN1Q86VF2 1251 aa11.15□□□□□ -0.63
CLSTN3-207ENST00000537408 KBTBD7Q8WVZ9 684 aa11.15□□□□□ -0.63
CLSTN3-207ENST00000537408 RMDN3Q96TC7 470 aa11.15□□□□□ -0.63
CLSTN3-207ENST00000537408 AVENQ9NQS1 362 aaPredicted RBP11.15□□□□□ -0.63
CLSTN3-207ENST00000537408 H3BMQ9 156 aa11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 CCRL2O00421 344 aa11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 VWA5AO00534 786 aa11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 MX2P20592 715 aa11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 SHMT1P34896 483 aa11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 TM4SF4P48230 202 aa11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 MRPS15P82914 257 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 TXNL4AP83876 142 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 MAP2K5Q13163 448 aa11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 AARS2Q5JTZ9 985 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 BTBD8Q5XKL5 378 aa11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 PGM2L1Q6PCE3 622 aa11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 USP17L6PQ6QN14 398 aa11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 LSMEM1Q8N8F7 131 aa11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 ANGPTL6Q8NI99 470 aa11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 COG8Q96MW5 612 aa11.14□□□□□ -0.63
CLSTN3-207ENST00000537408 STN1Q9H668 368 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms