RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PRKAG3Q9UGI9 489 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 CAPN7Q9Y6W3 813 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 A0A1W2PPM1 405 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 VAV1P15498 845 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 PGAM1P18669 254 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 AFF1P51825 1210 aaKnown RBP13.97□□□□□ -0.17
SMG6-203ENST00000536871 NRLP54845 237 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 TRIM32Q13049 653 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 SPDYAQ5MJ70 313 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 ACBD5Q5T8D3 534 aaPredicted RBP13.97□□□□□ -0.17
SMG6-203ENST00000536871 LVRNQ6Q4G3 990 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 UNC5AQ6ZN44 842 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 ZNF534Q76KX8 674 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 LRRC49Q8IUZ0 686 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 CTAGE3PQ8IX95 158 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 ACMSDQ8TDX5 336 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 NDRG1Q92597 394 aaKnown RBP13.97□□□□□ -0.17
SMG6-203ENST00000536871 FNIP2Q9P278 1114 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 MAD1L1Q9Y6D9 718 aa13.97□□□□□ -0.17
SMG6-203ENST00000536871 SYNJ2BP-COX16A0A087WUM0 186 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 MAGEB16A2A368 324 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 CFAP73A6NFT4 308 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 SYN3O14994 580 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 FGF10O15520 208 aaPredicted RBP13.96□□□□□ -0.17
SMG6-203ENST00000536871 EDF1O60869 148 aaKnown RBP13.96□□□□□ -0.17
SMG6-203ENST00000536871 ATP5HO75947 161 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 IL1BP01584 269 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 MYCNP04198 464 aaPredicted RBP13.96□□□□□ -0.17
SMG6-203ENST00000536871 CKBP12277 381 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 BDNFP23560 247 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 PRMT2P55345 433 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 DSC1Q08554 894 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 GALNT2Q10471 571 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 EFTUD2Q15029 972 aaKnown RBP eCLIP13.96□□□□□ -0.17
SMG6-203ENST00000536871 FAXCQ5TGI0 409 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 ARMC3Q5W041 872 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 CD300LGQ6UXG3 332 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 TIFABQ6ZNK6 161 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 DENND5BQ6ZUT9 1274 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 BHLHA9Q7RTU4 235 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 GPRIN1Q7Z2K8 1008 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 PPM1NQ8N819 430 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 SLC43A3Q8NBI5 491 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 MRRFQ96E11 262 aaKnown RBP13.96□□□□□ -0.17
SMG6-203ENST00000536871 LGMNQ99538 433 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 ELAC1Q9H777 363 aaKnown RBP13.96□□□□□ -0.17
SMG6-203ENST00000536871 RXFP1Q9HBX9 757 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 MLXIPLQ9NP71 852 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 RNF186Q9NXI6 227 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 MOCS1Q9NZB8 636 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 COX16Q9P0S2 106 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 PHTF1Q9UMS5 762 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 INPP5FQ9Y2H2 1132 aa13.96□□□□□ -0.17
SMG6-203ENST00000536871 COL4A4P53420 1690 aaPredicted RBP13.96□□□□□ -0.17
SMG6-203ENST00000536871 ANKRD65E5RJM6 399 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 COPEO14579 308 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 AVILO75366 819 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 DCTN3O75935 186 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 OAZ2O95190 189 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 MAP3K6O95382 1288 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 IGLV3-25P01717 112 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 C1QAP02745 245 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 TROVE2P10155 538 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMG6-203ENST00000536871 FOXN2P32314 431 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 SKIV2L2P42285 1042 aaKnown RBP13.95□□□□□ -0.18
SMG6-203ENST00000536871 BRCC3P46736 316 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 SCTRP47872 440 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 PITX1P78337 314 aaPredicted RBP13.95□□□□□ -0.18
SMG6-203ENST00000536871 MTA1Q13330 715 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 PRPSAP1Q14558 356 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 SETDB1Q15047 1291 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 NOMO2Q5JPE7 1267 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 STXBP5Q5T5C0 1151 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 BTBD8Q5XKL5 378 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 MARK2Q7KZI7 788 aaKnown RBP13.95□□□□□ -0.18
SMG6-203ENST00000536871 RAB3IL1Q8TBN0 382 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 TCP10LQ8TDR4 215 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 RNF34Q969K3 372 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 PAAF1Q9BRP4 392 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 OXCT2Q9BYC2 517 aaPredicted RBP13.95□□□□□ -0.18
SMG6-203ENST00000536871 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMG6-203ENST00000536871 TKTL2Q9H0I9 626 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 FBXO44Q9H4M3 255 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 CATSPERBQ9H7T0 1116 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 KIF9Q9HAQ2 790 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 TRMT13Q9NUP7 481 aaKnown RBP13.95□□□□□ -0.18
SMG6-203ENST00000536871 ARHGEF38Q9NXL2 777 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 KLHL8Q9P2G9 620 aaPredicted RBP13.95□□□□□ -0.18
SMG6-203ENST00000536871 OR12D3Q9UGF7 316 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 SLC12A4Q9UP95 1085 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 USH1CQ9Y6N9 552 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 KLF11O14901 512 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 POLBP06746 335 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 DHRS4L1P0CG22 281 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 SLC2A3P11169 496 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 CCR1P32246 355 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 CCNFP41002 786 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 NEK3P51956 506 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 NRG1Q02297 640 aaPredicted RBP13.95□□□□□ -0.18
SMG6-203ENST00000536871 FAAP100Q0VG06 881 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms