RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 H0Y626 953 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 PAPSS1O43252 624 aaPredicted RBP12.95□□□□□ -0.34
PRKDC-207ENST00000536483 SH3BP5O60239 455 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 TRIM16O95361 564 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 GLI1P08151 1106 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 HMBSP08397 361 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 CD6P30203 668 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 CDH5P33151 784 aaPredicted RBP12.95□□□□□ -0.34
PRKDC-207ENST00000536483 RDXP35241 583 aaKnown RBP12.95□□□□□ -0.34
PRKDC-207ENST00000536483 HARS2P49590 506 aaKnown RBP12.95□□□□□ -0.34
PRKDC-207ENST00000536483 ARHGAP44Q17R89 818 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 GEN1Q17RS7 908 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 FUT11Q495W5 492 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 MPP7Q5T2T1 576 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 SYCP2LQ5T4T6 812 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 SASS6Q6UVJ0 657 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 SCUBE3Q8IX30 993 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 EDEM1Q92611 657 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 SLC39A13Q96H72 371 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 ACP6Q9NPH0 428 aa12.95□□□□□ -0.34
PRKDC-207ENST00000536483 AJAP1Q9UKB5 411 aaPredicted RBP12.95□□□□□ -0.34
PRKDC-207ENST00000536483 NPC1O15118 1278 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 THAP12O43422 761 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 GJB3O75712 270 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 IGLV3-25P01717 112 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 C7P10643 843 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 HOXB3P14651 431 aaPredicted RBP12.94□□□□□ -0.34
PRKDC-207ENST00000536483 UCHL3P15374 230 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 GNSP15586 552 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 ZNF18P17022 549 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 IL12RB1P42701 662 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 SLC14A1Q13336 389 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 PDCLQ13371 301 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 ENPP2Q13822 863 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 HNRNPDQ14103 355 aaKnown RBP12.94□□□□□ -0.34
PRKDC-207ENST00000536483 STARD3Q14849 445 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 NCAPHQ15003 741 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 KRT31Q15323 416 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 TRIP6Q15654 476 aaKnown RBP12.94□□□□□ -0.34
PRKDC-207ENST00000536483 STX1AQ16623 288 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 WDR45BQ5MNZ6 344 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 ADGRF1Q5T601 910 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 NUGGCQ68CJ6 796 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 KIAA0907Q7Z7F0 614 aaPredicted RBP12.94□□□□□ -0.34
PRKDC-207ENST00000536483 DENND1CQ8IV53 801 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 UNC45BQ8IWX7 931 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 CLEC4CQ8WTT0 213 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 GOLGA1Q92805 767 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 FOXJ1Q92949 421 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 TOE1Q96GM8 510 aaKnown RBP12.94□□□□□ -0.34
PRKDC-207ENST00000536483 PIWIL1Q96J94 861 aaKnown RBP12.94□□□□□ -0.34
PRKDC-207ENST00000536483 STK33Q9BYT3 514 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 MKRN2Q9H000 416 aaKnown RBP12.94□□□□□ -0.34
PRKDC-207ENST00000536483 PRDM16Q9HAZ2 1276 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 FANCLQ9NW38 375 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 SUSD2Q9UGT4 822 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 LIMA1Q9UHB6 759 aaKnown RBP12.94□□□□□ -0.34
PRKDC-207ENST00000536483 SFMBT1Q9UHJ3 866 aa12.94□□□□□ -0.34
PRKDC-207ENST00000536483 FAM221BA6H8Z2 402 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 E5RJQ4 531 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 IRAK2O43187 625 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 TIMM44O43615 452 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 YWHAZP63104 245 aaKnown RBP12.93□□□□□ -0.34
PRKDC-207ENST00000536483 MYL5Q02045 173 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 GRIK2Q13002 908 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 DRAP1Q14919 205 aaPredicted RBP12.93□□□□□ -0.34
PRKDC-207ENST00000536483 E2F5Q15329 346 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 ZNF423Q2M1K9 1284 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 MPPE1Q53F39 396 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 C11orf57Q6ZUT1 292 aaPredicted RBP12.93□□□□□ -0.34
PRKDC-207ENST00000536483 APTXQ7Z2E3 356 aaKnown RBP12.93□□□□□ -0.34
PRKDC-207ENST00000536483 RAB44Q7Z6P3 723 aaPredicted RBP12.93□□□□□ -0.34
PRKDC-207ENST00000536483 METTL3Q86U44 580 aaKnown RBP12.93□□□□□ -0.34
PRKDC-207ENST00000536483 SLC47A2Q86VL8 602 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.93□□□□□ -0.34
PRKDC-207ENST00000536483 ZNF397Q8NF99 534 aaPredicted RBP12.93□□□□□ -0.34
PRKDC-207ENST00000536483 DQX1Q8TE96 717 aaKnown RBP12.93□□□□□ -0.34
PRKDC-207ENST00000536483 SERPINB11Q96P15 392 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 BPIFA3Q9BQP9 254 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 GPR174Q9BXC1 333 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 HSD3B7Q9H2F3 369 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 POPDC2Q9HBU9 364 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 ITM2CQ9NQX7 267 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 TMEM51Q9NW97 253 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 WSB2Q9NYS7 404 aaPredicted RBP12.93□□□□□ -0.34
PRKDC-207ENST00000536483 TMEM63CQ9P1W3 806 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 USP36Q9P275 1121 aaKnown RBP12.93□□□□□ -0.34
PRKDC-207ENST00000536483 THAP10Q9P2Z0 257 aaPredicted RBP12.93□□□□□ -0.34
PRKDC-207ENST00000536483 CLEC4EQ9ULY5 219 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 TLR6Q9Y2C9 796 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 PCDHB9Q9Y5E1 797 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 CELSR3Q9NYQ7 3312 aa12.93□□□□□ -0.34
PRKDC-207ENST00000536483 MEI4A8MW99 385 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 TAF4O00268 1085 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 CYBBP04839 570 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 NCAM1P13591 858 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 CYP11B1P15538 503 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 SCNN1AP37088 669 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 GABRB2P47870 512 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 SNX16P57768 344 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms