RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 NUMBP49757 651 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 ZNF165P49910 485 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 CDR2Q01850 454 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 ARID5AQ03989 594 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 LMAN2Q12907 356 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 ENPP2Q13822 863 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 IQCB1Q15051 598 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 SF3A2Q15428 464 aaKnown RBP14.78□□□□□ -0.04
UBE3B-206ENST00000536398 PTPRNQ16849 979 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 RSPO4Q2I0M5 234 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-206ENST00000536398 KLHL40Q2TBA0 621 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 FUT11Q495W5 492 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 MPP7Q5T2T1 576 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 PMS2CLQ68D20 193 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 MBLAC2Q68D91 279 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 TRNP1Q6NT89 227 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 CHSY1Q86X52 802 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 CIR1Q86X95 450 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-206ENST00000536398 MFN1Q8IWA4 741 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 TMEFF1Q8IYR6 380 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 CARNMT1Q8N4J0 409 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 DEFB119Q8N690 84 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 ZNF366Q8N895 744 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.78□□□□□ -0.04
UBE3B-206ENST00000536398 HJURPQ8NCD3 748 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-206ENST00000536398 SLC30A5Q8TAD4 765 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 UCMAQ8WVF2 138 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 RNF34Q969K3 372 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 LOXL4Q96JB6 756 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 BTN2A3PQ96KV6 586 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 DDX50Q9BQ39 737 aaKnown RBP14.78□□□□□ -0.04
UBE3B-206ENST00000536398 RTN4Q9NQC3 1192 aaKnown RBP14.78□□□□□ -0.04
UBE3B-206ENST00000536398 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.78□□□□□ -0.04
UBE3B-206ENST00000536398 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.78□□□□□ -0.04
UBE3B-206ENST00000536398 INTS6Q9UL03 887 aaKnown RBP14.78□□□□□ -0.04
UBE3B-206ENST00000536398 SNX10Q9Y5X0 201 aa14.78□□□□□ -0.04
UBE3B-206ENST00000536398 SMTNL1A8MU46 457 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 I6L893 689 aaPredicted RBP14.77□□□□□ -0.05
UBE3B-206ENST00000536398 TIMM44O43615 452 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 GDF9O60383 454 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 RHOBTB1O94844 696 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 GJB6O95452 261 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 ADCY5O95622 1261 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 CCR1P32246 355 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 ID4P47928 161 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 ATXN1P54253 815 aaKnown RBP14.77□□□□□ -0.05
UBE3B-206ENST00000536398 SNX16P57768 344 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 CREB5Q02930 508 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 EIF4HQ15056 248 aaKnown RBP14.77□□□□□ -0.05
UBE3B-206ENST00000536398 ELF2Q15723 593 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 CSRP2Q16527 193 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 FAM102AQ5T9C2 384 aaPredicted RBP14.77□□□□□ -0.05
UBE3B-206ENST00000536398 PRR23CQ6ZRP0 262 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 C14orf80Q86SX3 495 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 ZNF677Q86XU0 584 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 ZDHHC17Q8IUH5 632 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 GPR161Q8N6U8 529 aaKnown RBP14.77□□□□□ -0.05
UBE3B-206ENST00000536398 ATP6V0D2Q8N8Y2 350 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 FIBINQ8TAL6 211 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 MRGPRX1Q96LB2 322 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 NAP1L5Q96NT1 182 aaPredicted RBP14.77□□□□□ -0.05
UBE3B-206ENST00000536398 NPY6RQ99463 290 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 IRX2Q9BZI1 471 aaPredicted RBP14.77□□□□□ -0.05
UBE3B-206ENST00000536398 MKRN2Q9H000 416 aaKnown RBP14.77□□□□□ -0.05
UBE3B-206ENST00000536398 MTG2Q9H4K7 406 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 TMPRSS4Q9NRS4 437 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 RXFP3Q9NSD7 469 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 PIGVQ9NUD9 493 aa14.77□□□□□ -0.05
UBE3B-206ENST00000536398 MAP3K13O43283 966 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 LRP3O75074 770 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 LUC7L3O95232 432 aaKnown RBP14.76□□□□□ -0.05
UBE3B-206ENST00000536398 ABCB4P21439 1286 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 FLT3P36888 993 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 MPLP40238 635 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 CTSOP43234 321 aaPredicted RBP14.76□□□□□ -0.05
UBE3B-206ENST00000536398 SULT1E1P49888 294 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 IRAK1P51617 712 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 AUHQ13825 339 aaKnown RBP14.76□□□□□ -0.05
UBE3B-206ENST00000536398 FNDC3BQ53EP0 1204 aaKnown RBP14.76□□□□□ -0.05
UBE3B-206ENST00000536398 RAB6CQ53S08 254 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 PLA2G2CQ5R387 149 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 TCEAL6Q6IPX3 200 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 FBXL22Q6P050 247 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 KIAA1324Q6UXG2 1013 aaKnown RBP14.76□□□□□ -0.05
UBE3B-206ENST00000536398 SERPINA13PQ6UXR4 307 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 ARMCX6Q7L4S7 300 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 AHI1Q8N157 1196 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 WFIKKN2Q8TEU8 576 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 TCEAL3Q969E4 200 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 IGSF8Q969P0 613 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 NT5C3BQ969T7 300 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 TBCBQ99426 244 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 RAB6CQ9H0N0 254 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 CBX8Q9HC52 389 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 SLC12A6Q9UHW9 1150 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 TMEM59LQ9UK28 342 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 CYP8B1Q9UNU6 501 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 HS3ST4Q9Y661 456 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 SPAG17Q6Q759 2223 aa14.76□□□□□ -0.05
UBE3B-206ENST00000536398 IGHV1OR15-9A0A0B4J2B8 117 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms