RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SSTR1P30872 391 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 PTGS2P35354 604 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SLC1A1P43005 524 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SEPHS1P49903 392 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 RAD23AP54725 363 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 NUP107P57740 925 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 GPX6P59796 221 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 GPLD1P80108 840 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SREBF2Q12772 1141 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 KCNH2Q12809 1159 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 GRAPQ13588 217 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 BAATQ14032 418 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 DHX34Q14147 1143 aaKnown RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 LRIT3Q3SXY7 679 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 PTPN20Q4JDL3 420 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 GJC2Q5T442 439 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 PPP1R26Q5T8A7 1209 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 SLFN13Q68D06 897 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SULT1C3Q6IMI6 304 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 CENPPQ6IPU0 288 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 DHRS4L2Q6PKH6 230 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SLC30A10Q6XR72 485 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 DTHD1Q6ZMT9 781 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 BNC2Q6ZN30 1099 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 GPR141Q7Z602 305 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SLC22A16Q86VW1 577 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 NUDCD3Q8IVD9 361 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ANKRD13AQ8IZ07 590 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ZNF786Q8N393 782 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 BBOF1Q8ND07 529 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 GRAPLQ8TC17 118 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 SNX29Q8TEQ0 813 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SLC20A1Q8WUM9 679 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SGCDQ92629 289 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 TNFRSF25Q93038 417 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 TP53INP1Q96A56 240 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ARMC5Q96C12 935 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 HEXIM2Q96MH2 286 aaKnown RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 TMEM79Q9BSE2 394 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 APOL6Q9BWW8 343 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 PRRG3Q9BZD7 231 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 KLC2Q9H0B6 622 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 ZNF696Q9H7X3 374 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 BRD7Q9NPI1 651 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 SPATA6Q9NWH7 488 aaPredicted RBP3.83□□□□□ -1.8
MCF2-210ENST00000536274 QPCTLQ9NXS2 382 aa3.83□□□□□ -1.8
MCF2-210ENST00000536274 E2F8A0AVK6 867 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 DYNC1LI2O43237 492 aaPredicted RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 MSI1O43347 362 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 DENRO43583 198 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 GAS2O43903 313 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 CCNT2O60583 730 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 GAS7O60861 476 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 AKR1B1P15121 316 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 UCHL3P15374 230 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ZNF23P17027 643 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PSMC3P17980 439 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 MATN1P21941 496 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 IVDP26440 423 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ATP5DP30049 168 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 POLR2BP30876 1174 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 PHKA1P46020 1223 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 THOP1P52888 689 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 LSM3P62310 102 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 PPP2R5DQ14738 602 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 SIX1Q15475 284 aaPredicted RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 NPTX1Q15818 432 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 OGFRL1Q5TC84 451 aaPredicted RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 CST9Q5W186 159 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 CDHR3Q6ZTQ4 885 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 TRMT10CQ7L0Y3 403 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 TRIM59Q8IWR1 403 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 OFCC1Q8IZS5 231 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 AHI1Q8N157 1196 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PQLC1Q8N2U9 271 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 SPATA5Q8NB90 893 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 TNIP2Q8NFZ5 429 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 AGR3Q8TD06 166 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PCNPQ8WW12 178 aaKnown RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 ZUFSPQ96AP4 578 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ITPKCQ96DU7 683 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 RUNDC3BQ96NL0 473 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 BIRC8Q96P09 236 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PPP1R16BQ96T49 567 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 EMILIN2Q9BXX0 1053 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 NUF2Q9BZD4 464 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 SMARCAD1Q9H4L7 1026 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 CXorf21Q9HAI6 301 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 MCCC2Q9HCC0 563 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 MAGEE1Q9HCI5 957 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 GPRC5CQ9NQ84 441 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 KLHL11Q9NVR0 708 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 IGSF9Q9P2J2 1179 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 TAGLN3Q9UI15 199 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 CDH22Q9UJ99 828 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 ZNF229Q9UJW7 825 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 PMF1-BGLAPU3KQ54 211 aa3.82□□□□□ -1.8
MCF2-210ENST00000536274 TP53BP1Q12888 1972 aaPredicted RBP3.82□□□□□ -1.8
MCF2-210ENST00000536274 SF3B1O75533 1304 aaKnown RBP eCLIP3.82□□□□□ -1.8
MCF2-210ENST00000536274 ILVBLA1L0T0 632 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms