RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 PDK2Q15119 407 aa18.5■□□□□ 0.55
CACNB3-202ENST00000536187 NUGGCQ68CJ6 796 aa18.5■□□□□ 0.55
CACNB3-202ENST00000536187 RFX8Q6ZV50 586 aa18.5■□□□□ 0.55
CACNB3-202ENST00000536187 B4GALNT4Q76KP1 1039 aa18.5■□□□□ 0.55
CACNB3-202ENST00000536187 PSTKQ8IV42 348 aaKnown RBP18.5■□□□□ 0.55
CACNB3-202ENST00000536187 BBS7Q8IWZ6 715 aa18.5■□□□□ 0.55
CACNB3-202ENST00000536187 DEFB123Q8N688 67 aa18.5■□□□□ 0.55
CACNB3-202ENST00000536187 PLD5Q8N7P1 536 aa18.5■□□□□ 0.55
CACNB3-202ENST00000536187 ZNF670Q9BS34 389 aa18.5■□□□□ 0.55
CACNB3-202ENST00000536187 OSBPL2Q9H1P3 480 aa18.5■□□□□ 0.55
CACNB3-202ENST00000536187 RBM12Q9NTZ6 932 aaKnown RBP18.5■□□□□ 0.55
CACNB3-202ENST00000536187 TTC7AQ9ULT0 858 aaPredicted RBP18.5■□□□□ 0.55
CACNB3-202ENST00000536187 ARHGAP26Q9UNA1 814 aa18.5■□□□□ 0.55
CACNB3-202ENST00000536187 E9PAM4 449 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 EEF2KO00418 725 aaKnown RBP18.49■□□□□ 0.55
CACNB3-202ENST00000536187 ZNF197O14709 1029 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 RIOK3O14730 519 aaKnown RBP18.49■□□□□ 0.55
CACNB3-202ENST00000536187 ACSL4O60488 711 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 CST8O60676 142 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 CNTN5O94779 1100 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 SP100P23497 879 aaPredicted RBP18.49■□□□□ 0.55
CACNB3-202ENST00000536187 VIPR2P41587 438 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 MRPS25P82663 173 aaKnown RBP18.49■□□□□ 0.55
CACNB3-202ENST00000536187 PPP2R5EQ16537 467 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 ARHGAP15Q53QZ3 475 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 FAM78AQ5JUQ0 283 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 FBXL22Q6P050 247 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 RFX6Q8HWS3 928 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 ATP6V0D2Q8N8Y2 350 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 SMRP1Q8NCR6 262 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 MYADMQ96S97 322 aa18.49■□□□□ 0.55
CACNB3-202ENST00000536187 SLC2A3P11169 496 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 PTPN7P35236 360 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 HARS2P49590 506 aaKnown RBP18.48■□□□□ 0.55
CACNB3-202ENST00000536187 ALFQ53S48 1182 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 ODF2Q5BJF6 829 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 CFAP52Q8N1V2 620 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 NPWQ8N729 165 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 PRELID2Q8N945 189 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 TDP1Q9NUW8 608 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 MYOFQ9NZM1 2061 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 TSPAN3O60637 253 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 TACR2P21452 398 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 DDX6P26196 483 aaKnown RBP eCLIP18.48■□□□□ 0.55
CACNB3-202ENST00000536187 NUMBP49757 651 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 KPNA1P52294 538 aaPredicted RBP18.48■□□□□ 0.55
CACNB3-202ENST00000536187 TPI1P60174 286 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 GBE1Q04446 702 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 SLC10A2Q12908 348 aaPredicted RBP18.48■□□□□ 0.55
CACNB3-202ENST00000536187 ZNF77Q15935 545 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 WHAMMP3Q1A5X7 153 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 CCDC181Q5TID7 509 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 NCBP2-AS2Q69YL0 99 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 CHSY1Q86X52 802 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 UNC45BQ8IWX7 931 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 NOA1Q8NC60 698 aaKnown RBP18.48■□□□□ 0.55
CACNB3-202ENST00000536187 C1orf54Q8WWF1 131 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 C10orf88Q9H8K7 445 aa18.48■□□□□ 0.55
CACNB3-202ENST00000536187 GRXCR2A6NFK2 248 aa18.47■□□□□ 0.55
CACNB3-202ENST00000536187 DCLK1O15075 740 aa18.47■□□□□ 0.55
CACNB3-202ENST00000536187 ERCC2P18074 760 aa18.47■□□□□ 0.55
CACNB3-202ENST00000536187 FCARP24071 287 aa18.47■□□□□ 0.55
CACNB3-202ENST00000536187 EPHB2P29323 1055 aa18.47■□□□□ 0.55
CACNB3-202ENST00000536187 COPS2P61201 443 aa18.47■□□□□ 0.55
CACNB3-202ENST00000536187 RPS24P62847 133 aaKnown RBP18.47■□□□□ 0.55
CACNB3-202ENST00000536187 ITIH3Q06033 890 aa18.47■□□□□ 0.55
CACNB3-202ENST00000536187 SLC9A4Q6AI14 798 aa18.47■□□□□ 0.55
CACNB3-202ENST00000536187 RWDD4Q6NW29 188 aaKnown RBP18.47■□□□□ 0.55
CACNB3-202ENST00000536187 SPATA4Q8NEY3 305 aa18.47■□□□□ 0.55
CACNB3-202ENST00000536187 C1orf74Q96LT6 269 aa18.47■□□□□ 0.55
CACNB3-202ENST00000536187 USP15Q9Y4E8 981 aaPredicted RBP18.47■□□□□ 0.55
CACNB3-202ENST00000536187 NUP205Q92621 2012 aa18.47■□□□□ 0.55
CACNB3-202ENST00000536187 MFSD11O43934 449 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 FOSL2P15408 326 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 KCNA5P22460 613 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 HOXC13P31276 330 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 ARL4AP40617 200 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 ATAT1Q5SQI0 421 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 TTC27Q6P3X3 843 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 C1orf228Q6PIY5 440 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 BBS12Q6ZW61 710 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 TFAP2DQ7Z6R9 452 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 MAP7D3Q8IWC1 876 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 LGI2Q8N0V4 545 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 UBE2Q2Q8WVN8 375 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 BHMTQ93088 406 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 ASB16Q96NS5 453 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 ZNF212Q9UDV6 495 aa18.46■□□□□ 0.55
CACNB3-202ENST00000536187 H3BRJ5 948 aa18.46■□□□□ 0.54
CACNB3-202ENST00000536187 GFRA2O00451 464 aa18.46■□□□□ 0.54
CACNB3-202ENST00000536187 KRIT1O00522 736 aa18.46■□□□□ 0.54
CACNB3-202ENST00000536187 USP4Q13107 963 aa18.46■□□□□ 0.54
CACNB3-202ENST00000536187 CES5AQ6NT32 575 aa18.46■□□□□ 0.54
CACNB3-202ENST00000536187 HTR3DQ70Z44 454 aa18.46■□□□□ 0.54
CACNB3-202ENST00000536187 ZNF572Q7Z3I7 529 aaPredicted RBP18.46■□□□□ 0.54
CACNB3-202ENST00000536187 ASIC4Q96FT7 647 aa18.46■□□□□ 0.54
CACNB3-202ENST00000536187 EPAS1Q99814 870 aa18.46■□□□□ 0.54
CACNB3-202ENST00000536187 KLC2Q9H0B6 622 aa18.46■□□□□ 0.54
CACNB3-202ENST00000536187 DDX47Q9H0S4 455 aaKnown RBP18.46■□□□□ 0.54
CACNB3-202ENST00000536187 LINC00597Q9H2U6 94 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms