RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 KRT3P12035 628 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 ARSAP15289 507 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 DESP17661 470 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 CHKAP35790 457 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 FLT3P36888 993 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 PTPN9P43378 593 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 SULT1E1P49888 294 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 ARHGAP8P85298 464 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 AMPD2Q01433 879 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 SATB1Q01826 763 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 SRSF5Q13243 272 aaKnown RBP13.16□□□□□ -0.3
DDB1-207ENST00000535967 EIF4EBP2Q13542 120 aaPredicted RBP13.16□□□□□ -0.3
DDB1-207ENST00000535967 ASTE1Q2TB18 679 aaPredicted RBP13.16□□□□□ -0.3
DDB1-207ENST00000535967 SLC25A52Q3SY17 297 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 TRIM68Q6AZZ1 485 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 PLEKHA7Q6IQ23 1121 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 ALKBH5Q6P6C2 394 aaKnown RBP13.16□□□□□ -0.3
DDB1-207ENST00000535967 RALGPS2Q86X27 583 aaPredicted RBP13.16□□□□□ -0.3
DDB1-207ENST00000535967 FAM217AQ8IXS0 508 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 CPXM2Q8N436 756 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 WBP2Q969T9 261 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 AZIN2Q96A70 460 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 ZNF653Q96CK0 615 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 SLC39A13Q96H72 371 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 FCRL2Q96LA5 508 aaPredicted RBP13.16□□□□□ -0.3
DDB1-207ENST00000535967 TMUB1Q9BVT8 246 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 EBF3Q9H4W6 596 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 ECT2Q9H8V3 914 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 LMAN1LQ9HAT1 526 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 PARVAQ9NVD7 372 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.16□□□□□ -0.3
DDB1-207ENST00000535967 C2orf42Q9NWW7 574 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 DDIT4Q9NX09 232 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 STOML2Q9UJZ1 356 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 MRPS17Q9Y2R5 130 aaKnown RBP13.16□□□□□ -0.3
DDB1-207ENST00000535967 PIAS3Q9Y6X2 628 aa13.16□□□□□ -0.3
DDB1-207ENST00000535967 C2CD4BA6NLJ0 364 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 M0QYT0 321 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 MAN2B1O00754 1011 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 AKR1B10O60218 316 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 F9P00740 461 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 KLKB1P03952 638 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 CYP17A1P05093 508 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 RRM1P23921 792 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 SDC4P31431 198 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 CCR1P32246 355 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 SLC11A2P49281 568 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 RNASE9P60153 205 aaKnown RBP13.15□□□□□ -0.3
DDB1-207ENST00000535967 PITX1P78337 314 aaPredicted RBP13.15□□□□□ -0.3
DDB1-207ENST00000535967 TNK2Q07912 1038 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 PPP2R5DQ14738 602 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 CCDC122Q5T0U0 273 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 OTUD1Q5VV17 481 aaPredicted RBP13.15□□□□□ -0.3
DDB1-207ENST00000535967 SND1Q7KZF4 910 aaKnown RBP eCLIP13.15□□□□□ -0.39e-7■■□□□ 13.3
DDB1-207ENST00000535967 BNIPLQ7Z465 357 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 DENND1CQ8IV53 801 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 ADAM32Q8TC27 787 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 FAM3CQ92520 227 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 EXOC4Q96A65 974 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 CCDC42Q96M95 316 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 RTKNQ9BST9 563 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 FAM126AQ9BYI3 521 aaPredicted RBP13.15□□□□□ -0.3
DDB1-207ENST00000535967 NHEJ1Q9H9Q4 299 aaPredicted RBP13.15□□□□□ -0.3
DDB1-207ENST00000535967 MRPL47Q9HD33 250 aaKnown RBP13.15□□□□□ -0.3
DDB1-207ENST00000535967 SPHK2Q9NRA0 654 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 RBM12Q9NTZ6 932 aaKnown RBP13.15□□□□□ -0.3
DDB1-207ENST00000535967 GTSE1Q9NYZ3 720 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 MARK1Q9P0L2 795 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 CNOT8Q9UFF9 292 aaKnown RBP13.15□□□□□ -0.3
DDB1-207ENST00000535967 GMEB2Q9UKD1 530 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 AGO1Q9UL18 857 aaKnown RBP13.15□□□□□ -0.3
DDB1-207ENST00000535967 ZFYVE26Q68DK2 2539 aa13.15□□□□□ -0.3
DDB1-207ENST00000535967 IGF2RP11717 2491 aa13.15□□□□□ -0.31
DDB1-207ENST00000535967 SPECC1L-ADORA2AF8WAN1 911 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 HOXC11O43248 304 aaPredicted RBP13.14□□□□□ -0.31
DDB1-207ENST00000535967 GDF9O60383 454 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 ADRB1P08588 477 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 CHRNB1P11230 501 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 ADH5P11766 374 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 PDGFRAP16234 1089 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 GPD1P21695 349 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 SDHBP21912 280 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 CTHP32929 405 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 SOX9P48436 509 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 GFPT1Q06210 699 aaPredicted RBP13.14□□□□□ -0.31
DDB1-207ENST00000535967 DHCR24Q15392 516 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 BRMS1LQ5PSV4 323 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 ACBD5Q5T8D3 534 aaPredicted RBP13.14□□□□□ -0.31
DDB1-207ENST00000535967 LAIR1Q6GTX8 287 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 TRNP1Q6NT89 227 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 DCUN1D2Q6PH85 259 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 PRR23BQ6ZRT6 265 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 Q6ZS52 159 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 STRADAQ7RTN6 431 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 ADGRG2Q8IZP9 1017 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 EMC1Q8N766 993 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 ATP6V0D2Q8N8Y2 350 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 JOSD2Q8TAC2 188 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 BTN2A3PQ96KV6 586 aa13.14□□□□□ -0.31
DDB1-207ENST00000535967 CFAP57Q96MR6 1250 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms