RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 SERTAD1Q9UHV2 236 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 CEP83Q9Y592 693 aa8.38□□□□□ -1.07
CHFR-211ENST00000535897 LRRC72A6NJI9 287 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 TK2O00142 265 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 CAPN9O14815 690 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 ATXN7O15265 892 aaPredicted RBP8.37□□□□□ -1.07
CHFR-211ENST00000535897 MSI1O43347 362 aaKnown RBP8.37□□□□□ -1.07
CHFR-211ENST00000535897 TBL1XO60907 577 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 IGHV4-34P06331 123 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 CDK4P11802 303 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 CD70P32970 193 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 ARRB1P49407 418 aaPredicted RBP8.37□□□□□ -1.07
CHFR-211ENST00000535897 PPP3CAQ08209 521 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 PDE4CQ08493 712 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 ADIGQ0VDE8 80 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 GOLGA7BQ2TAP0 167 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 KMT5BQ4FZB7 885 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 HES3Q5TGS1 186 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 RFWD3Q6PCD5 774 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 NCEH1Q6PIU2 408 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 USP30Q70CQ3 517 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 MFN1Q8IWA4 741 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 CCDC117Q8IWD4 279 aaPredicted RBP8.37□□□□□ -1.07
CHFR-211ENST00000535897 DHX40Q8IX18 779 aaKnown RBP8.37□□□□□ -1.07
CHFR-211ENST00000535897 FAM186BQ8IYM0 893 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 TTC39CQ8N584 583 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 NDRG1Q92597 394 aaKnown RBP8.37□□□□□ -1.07
CHFR-211ENST00000535897 TMEM176AQ96HP8 235 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 INTS4Q96HW7 963 aaKnown RBP8.37□□□□□ -1.07
CHFR-211ENST00000535897 RSPH9Q9H1X1 276 aaPredicted RBP8.37□□□□□ -1.07
CHFR-211ENST00000535897 PABPC3Q9H361 631 aaKnown RBP8.37□□□□□ -1.07
CHFR-211ENST00000535897 KCTD10Q9H3F6 313 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 GDF3Q9NR23 364 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 CISHQ9NSE2 258 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 STIM2Q9P246 746 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 HESX1Q9UBX0 185 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 SCML1Q9UN30 329 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 HBS1LQ9Y450 684 aaKnown RBP8.37□□□□□ -1.07
CHFR-211ENST00000535897 PCDHGA1Q9Y5H4 931 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 COL5A1P20908 1838 aaPredicted RBP8.37□□□□□ -1.07
CHFR-211ENST00000535897 PTPRQQ9UMZ3 2332 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 KNTC1P50748 2209 aa8.37□□□□□ -1.07
CHFR-211ENST00000535897 A0A1W2PP55 124 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 A0A1W2PPC4 97 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 TYW5A2RUC4 315 aaKnown RBP8.36□□□□□ -1.07
CHFR-211ENST00000535897 MID1O15344 667 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 YKT6O15498 198 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 PAPSS1O43252 624 aaPredicted RBP8.36□□□□□ -1.07
CHFR-211ENST00000535897 TLX3O43711 291 aaPredicted RBP8.36□□□□□ -1.07
CHFR-211ENST00000535897 KLRC4O43908 158 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 SIN3BO75182 1162 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 C1QL1O75973 258 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 C1SP09871 688 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 SLFN14P0C7P3 912 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 CD19P15391 556 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 CD38P28907 300 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 PSMC2P35998 433 aaKnown RBP8.36□□□□□ -1.07
CHFR-211ENST00000535897 PSMD8P48556 350 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 SLC11A2P49281 568 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 SGSHP51688 502 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 RAD23BP54727 409 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 GALCP54803 685 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 CCDC173Q0VFZ6 552 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 CST6Q15828 149 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 SLC45A4Q5BKX6 768 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 RAB41Q5JT25 222 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 BSPRYQ5W0U4 402 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 RESP18Q5W5W9 173 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 KRT39Q6A163 491 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 GPR155Q7Z3F1 870 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 MMAAQ8IVH4 418 aaKnown RBP8.36□□□□□ -1.07
CHFR-211ENST00000535897 ZC3H3Q8IXZ2 948 aaKnown RBP8.36□□□□□ -1.07
CHFR-211ENST00000535897 CARNMT1Q8N4J0 409 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.36□□□□□ -1.07
CHFR-211ENST00000535897 ZNF557Q8N988 423 aaPredicted RBP8.36□□□□□ -1.07
CHFR-211ENST00000535897 ANKRD52Q8NB46 1076 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 SLC4A11Q8NBS3 891 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 SAP25Q8TEE9 199 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 TMEM174Q8WUU8 243 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 TATDN2Q93075 761 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 CCDC47Q96A33 483 aaKnown RBP8.36□□□□□ -1.07
CHFR-211ENST00000535897 PAGE5Q96GU1 130 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 SERAC1Q96JX3 654 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 ORAI3Q9BRQ5 295 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 UBXN6Q9BZV1 441 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 PRORYQ9H606 182 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 TMEM8AQ9HCN3 771 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 ABCC13Q9NSE7 274 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 SERGEFQ9UGK8 458 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 TSPAN16Q9UKR8 245 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 PCDHA7Q9UN72 937 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 MAPK8IP1Q9UQF2 711 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 RAI2Q9Y5P3 530 aa8.36□□□□□ -1.07
CHFR-211ENST00000535897 MYLKQ15746 1914 aa8.35□□□□□ -1.07
CHFR-211ENST00000535897 GOLGA6L7A0A1B0GV03 622 aa8.35□□□□□ -1.07
CHFR-211ENST00000535897 YJEFN3A6XGL0 299 aa8.35□□□□□ -1.07
CHFR-211ENST00000535897 E7ENQ6 273 aa8.35□□□□□ -1.07
CHFR-211ENST00000535897 TULP2O00295 520 aa8.35□□□□□ -1.07
CHFR-211ENST00000535897 XPO1O14980 1071 aaKnown RBP8.35□□□□□ -1.07
CHFR-211ENST00000535897 MAPK13O15264 365 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms