RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 MPP6Q9NZW5 540 aa18.82■□□□□ 0.6
HTATSF1-204ENST00000535601 PCDHB8Q9UN66 801 aa18.82■□□□□ 0.6
HTATSF1-204ENST00000535601 PCDHB7Q9Y5E2 793 aa18.82■□□□□ 0.6
HTATSF1-204ENST00000535601 WDR27A2RRH5 827 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 GCATO75600 419 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 SKIP12755 728 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 CA4P22748 312 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 STX2P32856 288 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 NR2C2P49116 596 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 NUGGCQ68CJ6 796 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 PM20D1Q6GTS8 502 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 PRSS55Q6UWB4 352 aaPredicted RBP18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 BCL7CQ8WUZ0 217 aaPredicted RBP18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 NCAPGQ9BPX3 1015 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 DSEQ9UL01 958 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 A0A0A0MRY4 1105 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 CFAP69A5D8W1 941 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 C2CD2LO14523 706 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 TNFRSF10BO14763 440 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 EOMESO95936 686 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 RPLP2P05387 115 aaKnown RBP18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 SLC11A1P49279 550 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 PPP1R21Q6ZMI0 780 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 SPATA13Q96N96 652 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 RNF208Q9H0X6 261 aa18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 KLHL8Q9P2G9 620 aaPredicted RBP18.81■□□□□ 0.6
HTATSF1-204ENST00000535601 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 TBKBP1A7MCY6 615 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 DFFAO00273 331 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 CPP00450 1065 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 ATP5DP30049 168 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 PHBP35232 272 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 CXCR3P49682 368 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 ZBTB17Q13105 803 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 SEMA3BQ13214 749 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 RTP2Q5QGT7 225 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 UNC5AQ6ZN44 842 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 SEPT5Q99719 369 aaPredicted RBP18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 A6NNZ2 444 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 TOP3BO95985 862 aaKnown RBP18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 FAM163BP0C2L3 166 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 FAM189BP81408 668 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 TUBB8Q3ZCM7 444 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 CNPY4Q8N129 248 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 SERAC1Q96JX3 654 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 UROC1Q96N76 676 aa18.8■□□□□ 0.6
HTATSF1-204ENST00000535601 C5orf60A6NFR6 353 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 CPB1P15086 417 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 MGAT1P26572 445 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 GMPRP36959 345 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 LIG3P49916 1009 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 PRKD1Q15139 912 aaPredicted RBP18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 C14orf80Q86SX3 495 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 MIB1Q86YT6 1006 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 SIGLEC10Q96LC7 697 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 CASD1Q96PB1 797 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 TSEN34Q9BSV6 310 aaKnown RBP18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 NKIRAS1Q9NYS0 192 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 GMIPQ9P107 970 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 SLC17A7Q9P2U7 560 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 ADAM28Q9UKQ2 775 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 LRFN2Q9ULH4 789 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 PAGE1O75459 146 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 XRCC4Q13426 336 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 CEP128Q6ZU80 1094 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 GIPC2Q8TF65 315 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 TGS1Q96RS0 853 aaKnown RBP18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 SMC6Q96SB8 1091 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 SLCO1B3Q9NPD5 702 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 MARCH5Q9NX47 278 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 PHF24Q9UPV7 400 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 ZBTB24O43167 697 aaPredicted RBP18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 CSH1P0DML2 217 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 CSH2P0DML3 217 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 ARL13BQ3SXY8 428 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 KDELC2Q7Z4H8 507 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 ZNF419Q96HQ0 510 aaPredicted RBP18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 TMEM161AQ9NX61 479 aa18.79■□□□□ 0.6
HTATSF1-204ENST00000535601 E2F8A0AVK6 867 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 FAM47DPA6NHR8 397 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 ADAM12O43184 909 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 PTPN3P26045 913 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 DNAJC3Q13217 504 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 PDK1Q15118 436 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 C4orf50Q6ZRC1 276 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 VSIG1Q86XK7 387 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 CENPTQ96BT3 561 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 GORASP1Q9BQQ3 440 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 TYMPP19971 482 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 ADRA1DP25100 572 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 CDK7P50613 346 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 SLC20A2Q08357 652 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 EFEMP1Q12805 493 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 MGAT5BQ3V5L5 792 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 PLEKHG4Q58EX7 1191 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 RNF19BQ6ZMZ0 732 aa18.78■□□□□ 0.6
HTATSF1-204ENST00000535601 OR52K1Q8NGK4 314 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms