RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SH3PXD2AQ5TCZ1 1133 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 NUDT18Q6ZVK8 323 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 TMC6Q7Z403 805 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 VPS36Q86VN1 386 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 CFAP52Q8N1V2 620 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 WFDC5Q8TCV5 224 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 MCEEQ96PE7 176 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 IRF2BPLQ9H1B7 796 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 STIM2Q9P246 746 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 HS3ST4Q9Y661 456 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 KIAA1549LQ6ZVL6 1849 aa23.52■■□□□ 1.36
SFSWAP-204ENST00000535399 A0A087X0T9 212 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 F5H5T6 163 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 ATMINO43313 823 aaPredicted RBP23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 FAM228BP0C875 321 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 HLA-FP30511 346 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 HOXC13P31276 330 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 ADKP55263 362 aaKnown RBP23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 ZNF528Q3MIS6 628 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 FBXL22Q6P050 247 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 SYT13Q7L8C5 426 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 STRADAQ7RTN6 431 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 ANKS1BQ7Z6G8 1248 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 FAM131BQ86XD5 332 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 IL17RCQ8NAC3 791 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 KCNV2Q8TDN2 545 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 NELL1Q92832 810 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 ACDQ96AP0 544 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 ABHD10Q9NUJ1 306 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 PARVAQ9NVD7 372 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 NENFQ9UMX5 172 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 PAXBP1Q9Y5B6 917 aa23.51■■□□□ 1.35
SFSWAP-204ENST00000535399 KLF8O95600 359 aaPredicted RBP23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 GGCXP38435 758 aa23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 EIF4A3P38919 411 aaKnown RBP23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 ZNF143P52747 638 aaPredicted RBP23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 HDAC4P56524 1084 aa23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 NHLH1Q02575 133 aa23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 AUHQ13825 339 aaKnown RBP23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 CDO1Q16878 200 aa23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 HSF5Q4G112 596 aaPredicted RBP23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 KIAA0907Q7Z7F0 614 aaPredicted RBP23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 C14orf80Q86SX3 495 aa23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 CCDC33Q8N5R6 958 aa23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 ALLCQ8N6M5 410 aa23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 LMLNQ96KR4 655 aa23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 ANP32EQ9BTT0 268 aa23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 ZDHHC4Q9NPG8 344 aa23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 TMPRSS4Q9NRS4 437 aa23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 CNOT8Q9UFF9 292 aaKnown RBP23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 MMP17Q9ULZ9 603 aa23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 SNX10Q9Y5X0 201 aa23.5■■□□□ 1.35
SFSWAP-204ENST00000535399 TYW5A2RUC4 315 aaKnown RBP23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 MYBL1P10243 752 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 OGDHQ02218 1023 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 DMC1Q14565 340 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 ASTE1Q2TB18 679 aaPredicted RBP23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 EGFLAMQ63HQ2 1017 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 TMEM215Q68D42 235 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 DCUN1D2Q6PH85 259 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 ZNF683Q8IZ20 524 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 TXNDC5Q8NBS9 432 aaKnown RBP23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 FIBINQ8TAL6 211 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 FAM172AQ8WUF8 416 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 ATOH1Q92858 354 aaPredicted RBP23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 IGSF8Q969P0 613 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 ZNF653Q96CK0 615 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 TRIM11Q96F44 468 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 MRFAP1L1Q96HT8 127 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 SIK2Q9H0K1 926 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 ABCB8Q9NUT2 735 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 FAM86C1Q9NVL1 165 aa23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 ZNHIT6Q9NWK9 470 aaKnown RBP23.49■■□□□ 1.35
SFSWAP-204ENST00000535399 AKR1B15C9JRZ8 316 aaPredicted RBP23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 SGK1O00141 431 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 CCP110O43303 1012 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 ADAM23O75077 832 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 LUC7L3O95232 432 aaKnown RBP23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 HOXA6P31267 233 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 DMWDQ09019 674 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 MAPK8IP2Q13387 824 aaPredicted RBP23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 C5orf22Q49AR2 442 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 ARTNQ5T4W7 220 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 ALKBH5Q6P6C2 394 aaKnown RBP23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 CIR1Q86X95 450 aaPredicted RBP23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 CNGA4Q8IV77 575 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 MFN1Q8IWA4 741 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 ZNF513Q8N8E2 541 aaPredicted RBP23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 WFIKKN2Q8TEU8 576 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 HAPLN3Q96S86 360 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 CNPY3Q9BT09 278 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 VANGL2Q9ULK5 521 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 SLC8A2Q9UPR5 921 aa23.48■■□□□ 1.35
SFSWAP-204ENST00000535399 ATG2BQ96BY7 2078 aa23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 SSU72P8A0A1W2PR75 194 aa23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 ANKRD62A6NC57 917 aa23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 TMEM191CA6NGB0 347 aa23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 PABPC1P11940 636 aaKnown RBP23.47■■□□□ 1.35
SFSWAP-204ENST00000535399 CD70P32970 193 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms