RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-205	ENST00000535375	TBC1D3E	A0A087X179	549 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	TBC1D3K	A0A087X1G2	549 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	LY6G6E	A0A0G2JKS1	128 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	TBC1D3B	A6NDS4	549 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	TBC1D3F	A6NER0	549 aa	Predicted RBP	5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	C3orf70	A6NLC5	250 aa	Predicted RBP	5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	KIF28P	B7ZC32	967 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	TBC1D3L	B9A6J9	549 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375		M0QYT0	321 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	RPP40	O75818	363 aa	Known RBP	5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	RFPL3S	P0C7P2	107 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	TBC1D3H	P0C7X1	549 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	KRTAP10-11	P60412	298 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	B4GALNT1	Q00973	533 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	TNFAIP2	Q03169	654 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	MANEA	Q5SRI9	462 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	TBC1D3G	Q6DHY5	549 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	AWAT2	Q6E213	333 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	TBC1D3C	Q6IPX1	549 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	TOGARAM2	Q6ZUX3	1019 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	IRF2BP2	Q7Z5L9	587 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	TBC1D3	Q8IZP1	549 aa	Predicted RBP	5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	ARL14EP	Q8N8R7	260 aa	Predicted RBP	5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	FAM71B	Q8TC56	605 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	ZFPM2	Q8WW38	1151 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	NAF1	Q96HR8	494 aa	Known RBP	5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	OBP2B	Q9NPH6	170 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	RAB21	Q9UL25	225 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375	SLC12A4	Q9UP95	1085 aa		5.76	□□□□□ -1.49
PRKDC-205	ENST00000535375		A0A087WV62	115 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	LOC105369274	A0A096LPK9	316 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	LOC102723532	A0A0G2JNH3	316 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375		H3BNX3	289 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	ZC3H11A	O75152	810 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	PPP6R2	O75170	966 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	SKAP2	O75563	359 aa	Predicted RBP	5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	CNTN5	O94779	1100 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	KAT7	O95251	611 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	LARGE1	O95461	756 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	SERPINB3	P29508	390 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	CIITA	P33076	1130 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	TAS2R50	P59544	299 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	RNASEL	Q05823	741 aa	Known RBP	5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	SRSF1	Q07955	248 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	PTK2B	Q14289	1009 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	TMEM88	Q6PEY1	159 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	C1orf228	Q6PIY5	440 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	ZNF474	Q6S9Z5	364 aa	Predicted RBP	5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	COLCA1	Q6ZS62	124 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	OR4N4	Q8N0Y3	316 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	MMP21	Q8N119	569 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	SLC44A5	Q8NCS7	719 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	ZNF548	Q8NEK5	533 aa	Predicted RBP	5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	STYX	Q8WUJ0	223 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	HMGB4	Q8WW32	186 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	RSC1A1	Q92681	617 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	WDR12	Q9GZL7	423 aa	Known RBP	5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	BRD8	Q9H0E9	1235 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	DECR2	Q9NUI1	292 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	TRPC5	Q9UL62	973 aa	Predicted RBP	5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	ZBTB1	Q9Y2K1	713 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	SQOR	Q9Y6N5	450 aa		5.75	□□□□□ -1.49
PRKDC-205	ENST00000535375	TTBK1	Q5TCY1	1321 aa	Predicted RBP	5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	LGALS16	A8MUM7	142 aa		5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	SYF2	O95926	243 aa	Known RBP	5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	TGM2	P21980	687 aa		5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	HTR3A	P46098	478 aa		5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	POLE2	P56282	527 aa		5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	RPL15	P61313	204 aa	Known RBP	5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	RBM6	P78332	1123 aa	Known RBP	5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	UBE4A	Q14139	1066 aa		5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	DLGAP5	Q15398	846 aa		5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	PFKFB4	Q16877	469 aa		5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	LRIG3	Q6UXM1	1119 aa		5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	PIP4P1	Q86T03	277 aa		5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	MYLK4	Q86YV6	388 aa	Predicted RBP	5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	WIPF2	Q8TF74	440 aa	Predicted RBP	5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	NSMCE1	Q8WV22	266 aa		5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	NLRP4	Q96MN2	994 aa		5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	TMEM120A	Q9BXJ8	343 aa		5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	UTS2R	Q9UKP6	389 aa		5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	AGO2	Q9UKV8	859 aa	Known RBP	5.74	□□□□□ -1.49
PRKDC-205	ENST00000535375	ABHD14A-ACY1	A0A1B0GW23	586 aa		5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	EFCAB8	A8MWE9	144 aa		5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	TNFRSF6B	O95407	300 aa		5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	NFATC1	O95644	943 aa		5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	ITGA2B	P08514	1039 aa		5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	CYP3A4	P08684	503 aa		5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	ALDOC	P09972	364 aa	Known RBP	5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	PSG1	P11464	419 aa		5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	ALDH7A1	P49419	539 aa	Known RBP	5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	SHC2	P98077	582 aa		5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	ICA1	Q05084	483 aa		5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	SF3A3	Q12874	501 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	PUM3	Q15397	648 aa	Known RBP	5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	ZACN	Q401N2	412 aa		5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	MIDN	Q504T8	468 aa		5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	ISM2	Q6H9L7	571 aa		5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	TECPR1	Q7Z6L1	1165 aa		5.73	□□□□□ -1.49
PRKDC-205	ENST00000535375	VCPIP1	Q96JH7	1222 aa		5.73	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms