RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 PDP2Q9P2J9 529 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 UMODL1Q5DID0 1318 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 ZMYM2Q9UBW7 1377 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 ACKR2O00590 384 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 AMPD1P23109 780 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 TMEM26Q6ZUK4 368 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 OR56A4Q8NGH8 313 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 WDR36Q8NI36 951 aaKnown RBP18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 ADI1Q9BV57 179 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 MYO3AQ8NEV4 1616 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 LINC00854A0A1B0GVQ3 168 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 ATP5BP06576 529 aaKnown RBP18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 ADRM1Q16186 407 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 TRIM16LQ309B1 348 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 KRT77Q7Z794 578 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 DEFB106AQ8N104 65 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 FNDC5Q8NAU1 212 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 C19orf60Q96EN9 201 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 CATSPER2Q96P56 530 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 NOD2Q9HC29 1040 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 GP5P40197 560 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 NR2C2P49116 596 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 PSMC6P62333 389 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 N4BP2L1Q5TBK1 243 aaPredicted RBP18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 RIPOR1Q6ZS17 1223 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 MILR1Q7Z6M3 343 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 FAM228AQ86W67 206 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 EPHX4Q8IUS5 362 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 REXO1L1PQ8IX06 675 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 ADAM32Q8TC27 787 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 GLIS2Q9BZE0 524 aaPredicted RBP18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 RNF208Q9H0X6 261 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 TAL1P17542 331 aaPredicted RBP18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 FAM98BQ52LJ0 330 aaKnown RBP18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 ARMC12Q5T9G4 340 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 MTDHQ86UE4 582 aaKnown RBP18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 ZSWIM2Q8NEG5 633 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 FBXO25Q8TCJ0 367 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 USP6NLQ92738 828 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 SH3GL2Q99962 352 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 AVENQ9NQS1 362 aaPredicted RBP18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 DUSP12Q9UNI6 340 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 NQO1P15559 274 aaKnown RBP18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 IGFBP4P22692 258 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 MGAT1P26572 445 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 TOB1P50616 345 aaPredicted RBP18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 KRR1Q13601 381 aaKnown RBP18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 ARMCX4Q5H9R4 360 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 FBXL19Q6PCT2 694 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 C10orf88Q9H8K7 445 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 MID1IP1Q9NPA3 183 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 SATB2Q9UPW6 733 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 STARD13Q9Y3M8 1113 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 A0A088AWK7 358 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 FAM25AB3EWG3 89 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 FAM25CB3EWG5 89 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 FAM25GB3EWG6 89 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 SMNDC1O75940 238 aaKnown RBP eCLIP18.55■□□□□ 0.561e-14■■■■□ 22.7
SFSWAP-203ENST00000535236 YBX3P16989 372 aaKnown RBP eCLIP18.55■□□□□ 0.563e-8■■□□□ 11.6
SFSWAP-203ENST00000535236 ZNF10P21506 573 aaPredicted RBP18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 GPR15P49685 360 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 RARRES1P49788 294 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 IKBKEQ14164 716 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 GNA13Q14344 377 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 CYP2A13Q16696 494 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 TBCELQ5QJ74 424 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 ZNF470Q6ECI4 717 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 CYP20A1Q6UW02 462 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 FAM205AQ6ZU69 1335 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 NEK10Q6ZWH5 1172 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 ZNF557Q8N988 423 aaPredicted RBP18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 RNFT2Q96EX2 444 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 DLC1Q96QB1 1528 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 A1CFQ9NQ94 594 aaKnown RBP18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 PRKAG3Q9UGI9 489 aa18.55■□□□□ 0.56
SFSWAP-203ENST00000535236 ADM5C9JUS6 153 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 KRT75O95678 551 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 IL5RAQ01344 420 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 ZPBP2Q6X784 338 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 PPP1R16AQ96I34 528 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 FAM153AQ9UHL3 310 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 PCDHA3Q9Y5H8 950 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 PAEPP09466 180 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 SHMT1P34896 483 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 KPNB1Q14974 876 aaKnown RBP18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 SEC23AQ15436 765 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 CASP12Q6UXS9 341 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 SCUBE3Q8IX30 993 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 SHOC2Q9UQ13 582 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 CTSEP14091 401 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 SLC1A6P48664 564 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 TMED10P49755 219 aaKnown RBP18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 ZBTB49Q6ZSB9 765 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 NIPA1Q7RTP0 329 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 CPNE1Q99829 537 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 PDGFDQ9GZP0 370 aaPredicted RBP18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 IL25Q9H293 177 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 TCF7L2Q9NQB0 619 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 ANKRD6Q9Y2G4 727 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 ADGRA3Q8IWK6 1321 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms