RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SRRTQ9BXP5 876 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 SLC2A11Q9BYW1 496 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 SUSD2Q9UGT4 822 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 CYP8B1Q9UNU6 501 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 CTNND2Q9UQB3 1225 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 PCDHB4Q9Y5E5 795 aa10.5□□□□□ -0.73
CLSTN3-203ENST00000534830 BIN1O00499 593 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 NDUFS2O75306 463 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 ZNF217O75362 1048 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 CALCAP01258 141 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 AFPP02771 609 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 FYNP06241 537 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 BRD2P25440 801 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 IL12RB1P42701 662 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 GPD2P43304 727 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 CETN1Q12798 172 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 SDE2Q6IQ49 451 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 LRRC69Q6ZNQ3 347 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 RRAGAQ7L523 313 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 LURAP1LQ8IV03 231 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 LSM14AQ8ND56 463 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 CLEC4CQ8WTT0 213 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 EDEM1Q92611 657 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 ERLEC1Q96DZ1 483 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 ZNF419Q96HQ0 510 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 MRGPRX1Q96LB2 322 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 FCRL3Q96P31 734 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 IPO9Q96P70 1041 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 CDC6Q99741 560 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 ZDHHC5Q9C0B5 715 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 PRORYQ9H606 182 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 IL21RQ9HBE5 538 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 CD93Q9NPY3 652 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 ELOVL2Q9NXB9 296 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 TOR4AQ9NXH8 423 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 RAD54BQ9Y620 910 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 STON1Q9Y6Q2 735 aa10.49□□□□□ -0.73
CLSTN3-203ENST00000534830 MYO18BQ8IUG5 2567 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 HECTD1Q9ULT8 2610 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 ARHGAP6O43182 974 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 TIMM44O43615 452 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 FBXO21O94952 628 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 LTFP02788 710 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 CYBBP04839 570 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 LCP1P13796 627 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 HLA-FP30511 346 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 HARS2P49590 506 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 RGS7P49802 495 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 SGSHP51688 502 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 ZNF445P59923 1031 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 UBE2HP62256 183 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 CFHR1Q03591 330 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 CAMK2BQ13554 666 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 ZNF234Q14588 700 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 MEA1Q16626 185 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 FUT11Q495W5 492 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 MPPE1Q53F39 396 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 WDR45BQ5MNZ6 344 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 ADGRF1Q5T601 910 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 ANKS1BQ7Z6G8 1248 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 IRF2BP1Q8IU81 584 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 SIX6OS1Q8N1H7 587 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 RHBDD1Q8TEB9 315 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 DDI1Q8WTU0 396 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 AZIN2Q96A70 460 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 LMLNQ96KR4 655 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 IRX2Q9BZI1 471 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 MKRN2Q9H000 416 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 SLC6A17Q9H1V8 727 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 GAREM1Q9H706 876 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 ITM2CQ9NQX7 267 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 TM7SF3Q9NS93 570 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 USP36Q9P275 1121 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 RWDD2AQ9UIY3 292 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 PTPRQQ9UMZ3 2332 aa10.48□□□□□ -0.73
CLSTN3-203ENST00000534830 M0QYV0 167 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 PIK3R2O00459 728 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 MSI1O43347 362 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 FGFR1OPO95684 399 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 CER1O95813 267 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 NCAM1P13591 858 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 HLA-EP13747 358 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 COPAP53621 1224 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 NNTQ13423 1086 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 EIF4EBP2Q13542 120 aaPredicted RBP10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 NUMA1Q14980 2115 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 EIF4HQ15056 248 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 E2F5Q15329 346 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 FAM133BQ5BKY9 247 aaKnown RBP10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 MPP7Q5T2T1 576 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 SMYD5Q6GMV2 418 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 BEND5Q7L4P6 421 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 STK32AQ8WU08 396 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 RNF139Q8WU17 664 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 UCMAQ8WVF2 138 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 ZNF606Q8WXB4 792 aa10.47□□□□□ -0.73
CLSTN3-203ENST00000534830 FOXJ1Q92949 421 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms