RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 F8VP50 259 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 CBFA2T3O75081 653 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 ZC3H11AO75152 810 aaKnown RBP eCLIP9.3□□□□□ -0.92
SF3B2-216ENST00000534765 ASGR1P07306 291 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 MZF1P28698 734 aaPredicted RBP9.3□□□□□ -0.92
SF3B2-216ENST00000534765 CHN2P52757 468 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 GPC5P78333 572 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 MBTPS1Q14703 1052 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 KCNA10Q16322 511 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 ZNF699Q32M78 642 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 EGFLAMQ63HQ2 1017 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 RNF43Q68DV7 783 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 RASGEF1CQ8N431 466 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 EMC1Q8N766 993 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 GDPD5Q8WTR4 605 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 CLEC4CQ8WTT0 213 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 NDRG1Q92597 394 aaKnown RBP9.3□□□□□ -0.92
SF3B2-216ENST00000534765 NSMCE3Q96MG7 304 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 TSC2P49815 1807 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 BHMG1C9JSJ3 638 aaPredicted RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 H3BSA7 217 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 GAS2O43903 313 aaKnown RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 SEC24DO94855 1032 aaPredicted RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 ERBB2P04626 1255 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 PRKAR2AP13861 404 aaKnown RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 TCEA1P23193 301 aaKnown RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 RPL5P46777 297 aaKnown RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 SLC5A3P53794 718 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 ALDH18A1P54886 795 aaKnown RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 C21orf59P57076 290 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 PRAMEP78395 509 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 FOXD4Q12950 439 aaPredicted RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 PDCD4Q53EL6 469 aaKnown RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 RIPOR1Q6ZS17 1223 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 RAPH1Q70E73 1250 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 SUN5Q8TC36 379 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 FNDC8Q8TC99 324 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 LRRN4Q8WUT4 740 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 KBTBD7Q8WVZ9 684 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 KHSRPQ92945 711 aaKnown RBP eCLIP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 CAPNS2Q96L46 248 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 SNX27Q96L92 541 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 MAGEB18Q96M61 343 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 PWWP2AQ96N64 755 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 SLC39A3Q9BRY0 314 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 CDC42EP4Q9H3Q1 356 aaKnown RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 RPF1Q9H9Y2 349 aaKnown RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 KIAA1586Q9HCI6 787 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 GID8Q9NWU2 228 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 HSFX1Q9UBD0 423 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 A0A1W2PQ67 120 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 FAM47DPA6NHR8 397 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 RIPK2O43353 540 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 TSPAN9O75954 239 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 AMHP03971 560 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 NRLP54845 237 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 AQP4P55087 323 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 CCDC137Q6PK04 289 aaKnown RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 SYCE1Q8N0S2 351 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 ATG4AQ8WYN0 398 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 COX4I2Q96KJ9 171 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 C2orf40Q9H1Z8 148 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 C10orf88Q9H8K7 445 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 STX18Q9P2W9 335 aaKnown RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 HCSTQ9UBK5 93 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 PIN4Q9Y237 131 aaKnown RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 SSX2IPQ9Y2D8 614 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 PCDHB2Q9Y5E7 798 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 CCDC195A0A1B0GUA6 201 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 H0YCG3 227 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 GSC2O15499 205 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 PIAS1O75925 651 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 ENO2P09104 434 aaPredicted RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 RFX1P22670 979 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 ESRRGP62508 458 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 DLG1Q12959 904 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 OGFOD2Q6N063 350 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 DPH6Q7L8W6 267 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 CLVS1Q8IUQ0 354 aaPredicted RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 GLIS1Q8NBF1 620 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 NIF3L1Q9GZT8 377 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 MRPL46Q9H2W6 279 aaKnown RBP9.29□□□□□ -0.92
SF3B2-216ENST00000534765 SNX25Q9H3E2 840 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 KRT82Q9NSB4 513 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 DTNAQ9Y4J8 743 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 PCDHA3Q9Y5H8 950 aa9.29□□□□□ -0.92
SF3B2-216ENST00000534765 SMIM35A0A1B0GVV1 85 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 GOLGA8TH3BQL2 631 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 J3QRK9 145 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 AP3B1O00203 1094 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 TAF4O00268 1085 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 MAGEB2O15479 319 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 CAPN1P07384 714 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 TMEM191BP0C7N4 346 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 MCF2P10911 925 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 ATF7P17544 494 aaPredicted RBP9.28□□□□□ -0.92
SF3B2-216ENST00000534765 IL1R2P27930 398 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 FOXN2P32314 431 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 GJA9P57773 515 aa9.28□□□□□ -0.92
SF3B2-216ENST00000534765 POU5F1BQ06416 359 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms