RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 MRPS31Q92665 395 aaKnown RBP17.64■□□□□ 0.41
PHRF1-206ENST00000534320 EME1Q96AY2 570 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 RNF157Q96PX1 679 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 PRDM16Q9HAZ2 1276 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 ETNK2Q9NVF9 386 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 CTNNAL1Q9UBT7 734 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 TRMT6Q9UJA5 497 aaKnown RBP17.64■□□□□ 0.41
PHRF1-206ENST00000534320 SALL4Q9UJQ4 1053 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 CDV3Q9UKY7 258 aaKnown RBP17.64■□□□□ 0.41
PHRF1-206ENST00000534320 DDX3YO15523 660 aaKnown RBP17.64■□□□□ 0.41
PHRF1-206ENST00000534320 URODP06132 367 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 ITGAVP06756 1048 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 RHOCP08134 193 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 RUNX1T1Q06455 604 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 FOXD4Q12950 439 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-206ENST00000534320 TRIP10Q15642 601 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 BBS12Q6ZW61 710 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 SZRD1Q7Z422 152 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 PIGZQ86VD9 579 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 B3GALNT2Q8NCR0 500 aa17.64■□□□□ 0.41
PHRF1-206ENST00000534320 COL1A2P08123 1366 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 ADGRA2Q96PE1 1338 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 CFAP99D6REC4 459 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 PTPN7P35236 360 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 C6orf10Q5SRN2 563 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 TSHZ1Q6ZSZ6 1077 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 EFL1Q7Z2Z2 1120 aaKnown RBP17.63■□□□□ 0.41
PHRF1-206ENST00000534320 TFAP2DQ7Z6R9 452 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 LRRC39Q96DD0 335 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 SHISA4Q96DD7 197 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 RXFP1Q9HBX9 757 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 TBKBP1A7MCY6 615 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 RASSF9O75901 435 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 CKMP06732 381 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 FECHP22830 423 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 SLC39A12Q504Y0 691 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 LRRC52Q8N7C0 313 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 RFWD2Q8NHY2 731 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 SCUBE2Q9NQ36 999 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 RPL22P35268 128 aaKnown RBP17.63■□□□□ 0.41
PHRF1-206ENST00000534320 ZNF135P52742 658 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-206ENST00000534320 FAAP100Q0VG06 881 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 ZNF555Q8NEP9 628 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 C12orf42Q96LP6 360 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 APOL5Q9BWW9 433 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 PDGFDQ9GZP0 370 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-206ENST00000534320 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-206ENST00000534320 TMEM191CA6NGB0 347 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 CHADO15335 359 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 EFCAB14O75071 495 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 PGK1P00558 417 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 NPY2RP49146 381 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 BLVRAP53004 296 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 CRYBB1P53674 252 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-206ENST00000534320 LRRC36Q1X8D7 754 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 PATL1Q86TB9 770 aaKnown RBP17.63■□□□□ 0.41
PHRF1-206ENST00000534320 LUZP2Q86TE4 346 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 CARNMT1Q8N4J0 409 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 C12orf29Q8N999 325 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 OMA1Q96E52 524 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 FOPNLQ96NB1 174 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 NR1H4Q96RI1 486 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-206ENST00000534320 KLHL25Q9H0H3 589 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 ZNF212Q9UDV6 495 aa17.63■□□□□ 0.41
PHRF1-206ENST00000534320 ASMTLO95671 621 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 MMP8P22894 467 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 YWHAQP27348 245 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 AUHQ13825 339 aaKnown RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 POLD3Q15054 466 aaPredicted RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 SPANXN3Q5MJ09 141 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 UGT3A1Q6NUS8 523 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 RIC8BQ9NVN3 520 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 TRDMT1O14717 391 aaKnown RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 ONECUT3O60422 494 aaPredicted RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 SKAP2O75563 359 aaPredicted RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 RENBPP51606 427 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 GTF2H3Q13889 308 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 AARS2Q5JTZ9 985 aaKnown RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 DEPDC1Q5TB30 811 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 GRTP1Q5TC63 336 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 TTC30AQ86WT1 665 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 PALB2Q86YC2 1186 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 SRPK1Q96SB4 655 aaKnown RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 ZNF214Q9UL59 606 aaPredicted RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 ZMYND8Q9ULU4 1186 aaPredicted RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 RAMP2O60895 175 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 SPIRE1Q08AE8 756 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 ARHGAP15Q53QZ3 475 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 N4BP2L1Q5TBK1 243 aaPredicted RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 LLGL2Q6P1M3 1020 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 DEFB128Q7Z7B8 93 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 SUGP1Q8IWZ8 645 aaKnown RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 CDK5RAP1Q96SZ6 601 aaKnown RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 VAT1Q99536 393 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 UBXN6Q9BZV1 441 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 NEUROG2Q9H2A3 272 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 LHX5Q9H2C1 402 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 WRAP73Q9P2S5 460 aaPredicted RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 HNRNPRO43390 633 aaKnown RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 CRTAMO95727 393 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms