RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ABLIM3O94929 683 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 ZNF202O95125 648 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 VNN2O95498 520 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 PRAMEF12O95522 483 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 CFIP05156 583 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 PRKCBP05771 671 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 ITGAVP06756 1048 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 CYP3A4P08684 503 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 OR4Q2P0C623 313 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 ATXN1LP0C7T5 689 aaKnown RBP3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 LCP1P13796 627 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 ARSAP15289 507 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 ARF4P18085 180 aaPredicted RBP3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 SMARCA1P28370 1054 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 DNAJA1P31689 397 aaKnown RBP3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 ELF1P32519 619 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 CLCNKBP51801 687 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 ADCY7P51828 1080 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 ROR1Q01973 937 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 CFHR1Q03591 330 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 SPIRE1Q08AE8 756 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 FCHO2Q0JRZ9 810 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 TWF1Q12792 350 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 GRSF1Q12849 480 aaKnown RBP eCLIP3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 DMC1Q14565 340 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 PRSS53Q2L4Q9 553 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 ITPRIPL2Q3MIP1 535 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 CCDC157Q569K6 752 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 C2orf27AQ580R0 203 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 XKR3Q5GH77 459 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 TMEM196Q5HYL7 178 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 EMC4Q5J8M3 183 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 GLRA4Q5JXX5 417 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 COLEC12Q5KU26 742 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 EMC10Q5UCC4 262 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 PMS2CLQ68D20 193 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 ANO7Q6IWH7 933 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 TMTC3Q6ZXV5 915 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 NIPA1Q7RTP0 329 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 MIER3Q7Z3K6 550 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 SRGAP1Q7Z6B7 1085 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 ZNF410Q86VK4 478 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 TAX1BP1Q86VP1 789 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 RALGPS2Q86X27 583 aaPredicted RBP3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 NOSTRINQ8IVI9 506 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 MB21D2Q8IYB1 491 aaPredicted RBP3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 SMAP1Q8IYB5 467 aaPredicted RBP3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 GPR65Q8IYL9 337 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 Q8N1Y9 231 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 FANCBQ8NB91 859 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 RNF149Q8NC42 400 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 RPLP0P6Q8NHW5 317 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 ZNF461Q8TAF7 563 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 DEPDC1BQ8WUY9 529 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 FAM167AQ96KS9 214 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 ZNF512Q96ME7 567 aaPredicted RBP3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 CCDC140Q96MF4 163 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 WWC2-AS2Q96NR7 200 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 LZTS2Q9BRK4 669 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 MEGF9Q9H1U4 602 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 EBF3Q9H4W6 596 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 PRORYQ9H606 182 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 CLMPQ9H6B4 373 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 SEC61A2Q9H9S3 476 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 IL21RQ9HBE5 538 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 POLD4Q9HCU8 107 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 UBN1Q9NPG3 1134 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 HPS4Q9NQG7 708 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 DIAPH3Q9NSV4 1193 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 MTRRQ9UBK8 725 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 TCEAL9Q9UHQ7 104 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 FBXL7Q9UJT9 491 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 FBXL5Q9UKA1 691 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 STRIP2Q9ULQ0 834 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 CCL26Q9Y258 94 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 GIT1Q9Y2X7 761 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 INSL5Q9Y5Q6 135 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 LOXHD1Q8IVV2 1947 aa3.26□□□□□ -1.89
CHMP4A-208ENST00000534106 BOD1L1Q8NFC6 3051 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 A0A087WV48 116 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 CCDC163A0A0D9SF12 145 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 H0Y626 953 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 SH2B2O14492 632 aaPredicted RBP3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 TRDMT1O14717 391 aaKnown RBP3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 FOXS1O43638 330 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 PRC1O43663 620 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 TLX3O43711 291 aaPredicted RBP3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 GAS7O60861 476 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 ATG13O75143 517 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 DDAH1O94760 285 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 B3GAT3O94766 335 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 STK10O94804 968 aaKnown RBP3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 TRIM16O95361 564 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 CNOT4O95628 575 aaKnown RBP3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 APBB3O95704 486 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 FOSP01100 380 aaPredicted RBP3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 POU2F2P09086 479 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 ATF4P18848 351 aaPredicted RBP3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 COMTP21964 271 aa3.25□□□□□ -1.89
CHMP4A-208ENST00000534106 MCM7P33993 719 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms