RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 MUC22E2RYF6 1773 aaPredicted RBP17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 GOLGA6L7A0A1B0GV03 622 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 TRIM49BA6NDI0 452 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 PIK3R2O00459 728 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 FLRT2O43155 660 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 IGLV3-27P01718 113 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 CAPNS1P04632 268 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 FMO5P49326 533 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 TBX4P57082 545 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 SUZ12Q15022 739 aaKnown RBP17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 CNGA2Q16280 664 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 KIF19Q2TAC6 998 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 PIK3R6Q5UE93 754 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 PMF1Q6P1K2 205 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 LRSAM1Q6UWE0 723 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 DBX2Q6ZNG2 339 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 FMR1NBQ8N0W7 255 aaPredicted RBP17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 ZNF557Q8N988 423 aaPredicted RBP17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 WFDC5Q8TCV5 224 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 GOLGA1Q92805 767 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 SMARCE1Q969G3 411 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 CDC6Q99741 560 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 GTPBP4Q9BZE4 634 aaKnown RBP17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 KIAA1522Q9P206 1035 aaPredicted RBP17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 STIM2Q9P246 746 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 SLCO1B1Q9Y6L6 691 aa17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 URB1O60287 2271 aaKnown RBP17.54■□□□□ 0.4
CAPRIN1-216ENST00000534042 GOLGA6L4A6NEF3 574 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 M0QYV0 167 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 IRAK2O43187 625 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 ACSL4O60488 711 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 GABBR2O75899 941 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 FSBPO95073 299 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 LTFP02788 710 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 SLC6A4P31645 630 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 CD70P32970 193 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 STILQ15468 1287 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 ZNF776Q68DI1 518 aaPredicted RBP17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 MFN1Q8IWA4 741 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 PPM1KQ8N3J5 372 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 BAHD1Q8TBE0 780 aaPredicted RBP17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 AZIN2Q96A70 460 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 BIRC7Q96CA5 298 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 DDX50Q9BQ39 737 aaKnown RBP17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 SGK2Q9HBY8 427 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 TM9SF3Q9HD45 589 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 OSGEPQ9NPF4 335 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 ANKRD6Q9Y2G4 727 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 SNX11Q9Y5W9 270 aa17.53■□□□□ 0.4
CAPRIN1-216ENST00000534042 DMXL2Q8TDJ6 3036 aa17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 TYW5A2RUC4 315 aaKnown RBP17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 RNF225M0QZC1 329 aaPredicted RBP17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 PSMA7O14818 248 aa17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 FBXO21O94952 628 aa17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 BRD2P25440 801 aaKnown RBP17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 GRIA4P48058 902 aa17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 ST8SIA6P61647 398 aa17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 CETN1Q12798 172 aa17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 STIM1Q13586 685 aa17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 FAM133BQ5BKY9 247 aaKnown RBP17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 HJURPQ8NCD3 748 aaPredicted RBP17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 GANCQ8TET4 914 aa17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 CLEC4CQ8WTT0 213 aa17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 ERCC4Q92889 916 aaPredicted RBP17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 HSFY1Q96LI6 401 aa17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 ZSWIM1Q9BR11 485 aa17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 CCDC86Q9H6F5 360 aaKnown RBP17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 NCKAP1Q9Y2A7 1128 aa17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 ADAMTS20P59510 1910 aa17.52■□□□□ 0.4
CAPRIN1-216ENST00000534042 PMM2O15305 246 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 ASLP04424 464 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 ATXN1LP0C7T5 689 aaKnown RBP17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 HOXB3P14651 431 aaPredicted RBP17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 CD27P26842 260 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 CCDC40Q4G0X9 1142 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 NADSYN1Q6IA69 706 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 ADAT2Q7Z6V5 191 aaKnown RBP17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 CCDC117Q8IWD4 279 aaPredicted RBP17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 FIBINQ8TAL6 211 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 SPATA20Q8TB22 786 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 KAT5Q92993 513 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 IGSF8Q969P0 613 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 TTC17Q96AE7 1141 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 CEP63Q96MT8 703 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 MIS12Q9H081 205 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 RSPH9Q9H1X1 276 aaPredicted RBP17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 MTG2Q9H4K7 406 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 HOOK1Q9UJC3 728 aaKnown RBP17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 SCML1Q9UN30 329 aa17.51■□□□□ 0.39
CAPRIN1-216ENST00000534042 BAHCC1Q9P281 2608 aa17.5■□□□□ 0.39
CAPRIN1-216ENST00000534042 GOLGA8CPA6NN73 597 aa17.5■□□□□ 0.39
CAPRIN1-216ENST00000534042 RNASEH1O60930 286 aaKnown RBP17.5■□□□□ 0.39
CAPRIN1-216ENST00000534042 CSKP41240 450 aa17.5■□□□□ 0.39
CAPRIN1-216ENST00000534042 RPS24P62847 133 aaKnown RBP17.5■□□□□ 0.39
CAPRIN1-216ENST00000534042 SFSWAPQ12872 951 aaKnown RBP17.5■□□□□ 0.39
CAPRIN1-216ENST00000534042 KIAA0895LQ68EN5 471 aa17.5■□□□□ 0.39
CAPRIN1-216ENST00000534042 USP30Q70CQ3 517 aa17.5■□□□□ 0.39
CAPRIN1-216ENST00000534042 TMPRSS7Q7RTY8 843 aa17.5■□□□□ 0.39
CAPRIN1-216ENST00000534042 CARNMT1Q8N4J0 409 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms