RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 BRMS1LQ5PSV4 323 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 TTC39BQ5VTQ0 682 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 CHST9Q7L1S5 443 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 PHF13Q86YI8 300 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 AHI1Q8N157 1196 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 CFAP52Q8N1V2 620 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 HMGB4Q8WW32 186 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 RPRD1AQ96P16 312 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 TBCBQ99426 244 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 NPY6RQ99463 290 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 XPO4Q9C0E2 1151 aaKnown RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 SIK2Q9H0K1 926 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 HAUS4Q9H6D7 363 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 PIGVQ9NUD9 493 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 ELOVL2Q9NXB9 296 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 CACNA2D2Q9NY47 1150 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 AIPL1Q9NZN9 384 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 NCDNQ9UBB6 729 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 XPO7Q9UIA9 1087 aaKnown RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 LUC7L2Q9Y383 392 aaKnown RBP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.85□□□□□ -0.19
CAPN1-227ENST00000533909 FAM186AA6NE01 2351 aa13.85□□□□□ -0.19
CAPN1-227ENST00000533909 A0A1W2PQJ5 194 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 ANTXRLA6NF34 631 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 LILRB5O75023 590 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 PAGE1O75459 146 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 MOCS3O95396 460 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 ATP5BP06576 529 aaKnown RBP13.84□□□□□ -0.19
CAPN1-227ENST00000533909 PABPC1P11940 636 aaKnown RBP13.84□□□□□ -0.19
CAPN1-227ENST00000533909 HLA-FP30511 346 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 RDXP35241 583 aaKnown RBP13.84□□□□□ -0.19
CAPN1-227ENST00000533909 CXCR3P49682 368 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 ATP11AP98196 1134 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 LPAL2Q16609 132 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 CDO1Q16878 200 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 ARL13BQ3SXY8 428 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 FNDC3BQ53EP0 1204 aaKnown RBP13.84□□□□□ -0.19
CAPN1-227ENST00000533909 ACAD10Q6JQN1 1059 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 DCUN1D2Q6PH85 259 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 SERPINA13PQ6UXR4 307 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 LRRC31Q6UY01 552 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 ARCQ7LC44 396 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 ASCL5Q7RTU5 278 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 EMC1Q8N766 993 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 C3orf20Q8ND61 904 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 P2RY11Q96G91 374 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 CFAP57Q96MR6 1250 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 PRICKLE1Q96MT3 831 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-227ENST00000533909 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.84□□□□□ -0.19
CAPN1-227ENST00000533909 TPSD1Q9BZJ3 242 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 TKTL2Q9H0I9 626 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 EPC1Q9H2F5 836 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 TMEM59LQ9UK28 342 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 GMEB2Q9UKD1 530 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 CLEC4EQ9ULY5 219 aa13.84□□□□□ -0.19
CAPN1-227ENST00000533909 BZW2Q9Y6E2 419 aaKnown RBP13.84□□□□□ -0.19
CAPN1-227ENST00000533909 GPR179Q6PRD1 2367 aa13.83□□□□□ -0.19
CAPN1-227ENST00000533909 GVINP1Q7Z2Y8 2422 aa13.83□□□□□ -0.19
CAPN1-227ENST00000533909 GFRA2O00451 464 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 ADAM23O75077 832 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 LUC7L3O95232 432 aaKnown RBP13.83□□□□□ -0.2
CAPN1-227ENST00000533909 HNRNPLP14866 589 aaKnown RBP eCLIP13.83□□□□□ -0.2
CAPN1-227ENST00000533909 OXCT1P55809 520 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 ST8SIA6P61647 398 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 ZBED6P86452 979 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 SRSF5Q13243 272 aaKnown RBP13.83□□□□□ -0.2
CAPN1-227ENST00000533909 AUHQ13825 339 aaKnown RBP13.83□□□□□ -0.2
CAPN1-227ENST00000533909 BYSLQ13895 437 aaKnown RBP13.83□□□□□ -0.2
CAPN1-227ENST00000533909 TSR1Q2NL82 804 aaKnown RBP13.83□□□□□ -0.2
CAPN1-227ENST00000533909 ACBD5Q5T8D3 534 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-227ENST00000533909 RNF219Q5W0B1 726 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-227ENST00000533909 TMEM92Q6UXU6 159 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 MON1BQ7L1V2 547 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 FIBINQ8TAL6 211 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 GAB3Q8WWW8 586 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 RXFP2Q8WXD0 754 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 ERLEC1Q96DZ1 483 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 PGAP3Q96FM1 320 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-227ENST00000533909 SPACA7Q96KW9 195 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 ACOX2Q99424 681 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 TTYH3Q9C0H2 523 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 KIAA1522Q9P206 1035 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-227ENST00000533909 EBF1Q9UH73 591 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 VANGL2Q9ULK5 521 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 STON1Q9Y6Q2 735 aa13.83□□□□□ -0.2
CAPN1-227ENST00000533909 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-227ENST00000533909 A0A1B0GVM2 712 aa13.82□□□□□ -0.2
CAPN1-227ENST00000533909 TCAF2A6NFQ2 919 aa13.82□□□□□ -0.2
CAPN1-227ENST00000533909 MAP3K13O43283 966 aa13.82□□□□□ -0.2
CAPN1-227ENST00000533909 HRO43593 1189 aa13.82□□□□□ -0.2
CAPN1-227ENST00000533909 GJB6O95452 261 aa13.82□□□□□ -0.2
CAPN1-227ENST00000533909 ADCY5O95622 1261 aa13.82□□□□□ -0.2
CAPN1-227ENST00000533909 SKILP12757 684 aa13.82□□□□□ -0.2
CAPN1-227ENST00000533909 TFE3P19532 575 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-227ENST00000533909 GPD1P21695 349 aa13.82□□□□□ -0.2
CAPN1-227ENST00000533909 HOXC13P31276 330 aa13.82□□□□□ -0.2
CAPN1-227ENST00000533909 HOXD11P31277 338 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-227ENST00000533909 CD70P32970 193 aa13.82□□□□□ -0.2
CAPN1-227ENST00000533909 PBX1P40424 430 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms