RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 A0A088AWK7 358 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 SDR42E2A6NKP2 422 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 SERPINA6P08185 405 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 ARRB2P32121 409 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 PGGT1BP53609 377 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 DSG1Q02413 1049 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 CBX3Q13185 183 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 VGLL4Q14135 290 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 CMPK2Q5EBM0 449 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 TEDDM1Q5T9Z0 273 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 CDKL3Q8IVW4 592 aaPredicted RBP19.88■□□□□ 0.77
CAPN1-226ENST00000533820 NLRP7Q8WX94 980 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 AZIN2Q96A70 460 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 XPNPEP3Q9NQH7 507 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 SOX13Q9UN79 622 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 PCDHA11Q9Y5I1 949 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 CCDC78A2IDD5 438 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 ADCY6O43306 1168 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 CCDC130P13994 396 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 L1CAMP32004 1257 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 TP53INP2Q8IXH6 220 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 ECSITQ9BQ95 431 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 EBF3Q9H4W6 596 aa19.88■□□□□ 0.77
CAPN1-226ENST00000533820 MAGEA13PA6NCF6 341 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 GSRP00390 522 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 VAV1P15498 845 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 EDNRBP24530 442 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 CDC16Q13042 620 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 ITGA9Q13797 1035 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 DNAL1Q4LDG9 190 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 GATA6Q92908 595 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 CYP3A43Q9HB55 503 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 DTLQ9NZJ0 730 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 SPATA7Q9P0W8 599 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 HESX1Q9UBX0 185 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 NME7Q9Y5B8 376 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.87■□□□□ 0.77
CAPN1-226ENST00000533820 LYNP07948 512 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 TGFB3P10600 412 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 FGF3P11487 239 aaPredicted RBP19.87■□□□□ 0.77
CAPN1-226ENST00000533820 CD1EP15812 388 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 PPP2R5DQ14738 602 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 MBLAC2Q68D91 279 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 MAVSQ7Z434 540 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 DEFB132Q7Z7B7 95 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 FAM149B1Q96BN6 582 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 KCTD15Q96SI1 283 aaPredicted RBP19.87■□□□□ 0.77
CAPN1-226ENST00000533820 TMEM216Q9P0N5 145 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 SCN1AP35498 2009 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 ANK1P16157 1881 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 TXNDC9O14530 226 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 SIN3BO75182 1162 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 STK10O94804 968 aaKnown RBP19.87■□□□□ 0.77
CAPN1-226ENST00000533820 HNRNPCP07910 306 aaKnown RBP eCLIP19.87■□□□□ 0.77
CAPN1-226ENST00000533820 SERPINB6P35237 376 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 RBP5P82980 135 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 ASPHQ12797 758 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 SOWAHAQ2M3V2 549 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 PHTF2Q8N3S3 785 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 COLGALT1Q8NBJ5 622 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 RTP4Q96DX8 246 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 CSPG4P5Q96PW8 444 aa19.87■□□□□ 0.77
CAPN1-226ENST00000533820 E9PBE3 544 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 PDLIM1O00151 329 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 KLHL41O60662 606 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 IL1BP01584 269 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 ZNF286BP0CG31 522 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 TYK2P29597 1187 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 CPOXP36551 454 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 PACS1Q6VY07 963 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 RASSF3Q86WH2 238 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 RIOX2Q8IUF8 465 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 NME8Q8N427 588 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 OTUD5Q96G74 571 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 PRMT7Q9NVM4 692 aaPredicted RBP19.86■□□□□ 0.77
CAPN1-226ENST00000533820 TXNDC16Q9P2K2 825 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 DOCK1Q14185 1865 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 SOCS7O14512 581 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 DCXO43602 365 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 RXRBP28702 533 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 CA8P35219 290 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 WASHC5Q12768 1159 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 STILQ15468 1287 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 SESTD1Q86VW0 696 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 HPS6Q86YV9 775 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 TXNRD2Q9NNW7 524 aa19.86■□□□□ 0.77
CAPN1-226ENST00000533820 RNASEH1O60930 286 aaKnown RBP19.85■□□□□ 0.77
CAPN1-226ENST00000533820 ATXN3P54252 364 aaPredicted RBP19.85■□□□□ 0.77
CAPN1-226ENST00000533820 PITX1P78337 314 aaPredicted RBP19.85■□□□□ 0.77
CAPN1-226ENST00000533820 Q3C1V9 767 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 DEFB107AQ8IZN7 70 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 MCUQ8NE86 351 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 C17orf50Q8WW18 174 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 C18orf25Q96B23 403 aaPredicted RBP19.85■□□□□ 0.77
CAPN1-226ENST00000533820 FRMD8Q9BZ67 464 aaPredicted RBP19.85■□□□□ 0.77
CAPN1-226ENST00000533820 F8W8V4 182 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 KCNK1O00180 336 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 PLIN3O60664 434 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 SAT1P21673 171 aa19.85■□□□□ 0.77
CAPN1-226ENST00000533820 RPS12P25398 132 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms