RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 FAM124AQ86V42 546 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 SYT12Q8IV01 421 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 LGI2Q8N0V4 545 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 DEFB106AQ8N104 65 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 AHI1Q8N157 1196 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 WDTC1Q8N5D0 677 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 PRCCQ92733 491 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-225ENST00000533704 MYEOVQ96EZ4 313 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 SIPA1Q96FS4 1042 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 PRICKLE1Q96MT3 831 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-225ENST00000533704 NUSAP1Q9BXS6 441 aaKnown RBP10.83□□□□□ -0.68
CAPN1-225ENST00000533704 MKRN2Q9H000 416 aaKnown RBP10.83□□□□□ -0.68
CAPN1-225ENST00000533704 VPS16Q9H269 839 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 CD248Q9HCU0 757 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 TMEM9BQ9NQ34 198 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 TMEM74BQ9NUR3 256 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 DDIT4Q9NX09 232 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 XPO7Q9UIA9 1087 aaKnown RBP10.83□□□□□ -0.68
CAPN1-225ENST00000533704 PCDHGC3Q9UN70 934 aa10.83□□□□□ -0.68
CAPN1-225ENST00000533704 H0Y626 953 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 HSF2BPO75031 334 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 ERBB2P04626 1255 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 ATP5BP06576 529 aaKnown RBP10.82□□□□□ -0.68
CAPN1-225ENST00000533704 TPM2P07951 284 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 ACADMP11310 421 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 TACR2P21452 398 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 EEF1GP26641 437 aaKnown RBP10.82□□□□□ -0.68
CAPN1-225ENST00000533704 NUMBP49757 651 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 SNX16P57768 344 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 BPIFB4P59827 614 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 KCNMA1Q12791 1236 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 LMAN2Q12907 356 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 NME3Q13232 169 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 NNTQ13423 1086 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 MS4A13Q5J8X5 152 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 EFHC1Q5JVL4 640 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 KLHDC7AQ5VTJ3 777 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 DAB2IPQ5VWQ8 1189 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 SASS6Q6UVJ0 657 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 MMS22LQ6ZRQ5 1243 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 CLEC17AQ6ZS10 378 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 C11orf57Q6ZUT1 292 aaPredicted RBP10.82□□□□□ -0.68
CAPN1-225ENST00000533704 ADIPOR2Q86V24 386 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 SLC41A1Q8IVJ1 513 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 ATP6V0D2Q8N8Y2 350 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 DDX1Q92499 740 aaKnown RBP10.82□□□□□ -0.68
CAPN1-225ENST00000533704 AZIN2Q96A70 460 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 TOE1Q96GM8 510 aaKnown RBP10.82□□□□□ -0.68
CAPN1-225ENST00000533704 SLC39A13Q96H72 371 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 GTPBP2Q9BX10 602 aaKnown RBP10.82□□□□□ -0.68
CAPN1-225ENST00000533704 GPR174Q9BXC1 333 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 FSCN3Q9NQT6 498 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 SLC12A6Q9UHW9 1150 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 PILRBQ9UKJ0 227 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 TP53BP1Q12888 1972 aaPredicted RBP10.82□□□□□ -0.68
CAPN1-225ENST00000533704 KNL1Q8NG31 2342 aa10.82□□□□□ -0.68
CAPN1-225ENST00000533704 DNAH14Q0VDD8 3507 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 MEI4A8MW99 385 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 F5H5T6 163 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 LUC7L3O95232 432 aaKnown RBP10.81□□□□□ -0.68
CAPN1-225ENST00000533704 DLDP09622 509 aaKnown RBP10.81□□□□□ -0.68
CAPN1-225ENST00000533704 ABCB4P21439 1286 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 MAOBP27338 520 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 CD6P30203 668 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 CSKP41240 450 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 DPP6P42658 865 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 TPMTP51580 245 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 ATXN3P54252 364 aaPredicted RBP10.81□□□□□ -0.68
CAPN1-225ENST00000533704 RNASE9P60153 205 aaKnown RBP10.81□□□□□ -0.68
CAPN1-225ENST00000533704 ST8SIA6P61647 398 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 ENPP2Q13822 863 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 KRT31Q15323 416 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 PTPN20Q4JDL3 420 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 CT47A1Q5JQC4 288 aaPredicted RBP10.81□□□□□ -0.68
CAPN1-225ENST00000533704 SPDYCQ5MJ68 293 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 MPP7Q5T2T1 576 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 SYCP2LQ5T4T6 812 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 BEND5Q7L4P6 421 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 CIR1Q86X95 450 aaPredicted RBP10.81□□□□□ -0.68
CAPN1-225ENST00000533704 FAM71AQ8IYT1 594 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.81□□□□□ -0.68
CAPN1-225ENST00000533704 ZNF557Q8N988 423 aaPredicted RBP10.81□□□□□ -0.68
CAPN1-225ENST00000533704 TMEM35BQ8NCS4 154 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 OR2T3Q8NH03 318 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 FIBINQ8TAL6 211 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 ENOX1Q8TC92 643 aaKnown RBP10.81□□□□□ -0.68
CAPN1-225ENST00000533704 BTN2A3PQ96KV6 586 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 PCMTD1Q96MG8 357 aaPredicted RBP10.81□□□□□ -0.68
CAPN1-225ENST00000533704 SLC2A13Q96QE2 648 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 IRX2Q9BZI1 471 aaPredicted RBP10.81□□□□□ -0.68
CAPN1-225ENST00000533704 MIR1-1HGQ9H1L0 117 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 LHX5Q9H2C1 402 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 MTG2Q9H4K7 406 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.81□□□□□ -0.68
CAPN1-225ENST00000533704 PCNX2A6NKB5 2137 aa10.81□□□□□ -0.68
CAPN1-225ENST00000533704 PCDH15Q96QU1 1955 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 KCNU1A8MYU2 1149 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 GOLGA8SH3BPF8 625 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 DAB1O75553 588 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 MOCS3O95396 460 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms