RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ZC3H12AQ5D1E8 599 aaKnown RBP16.02■□□□□ 0.16
CPSF1-211ENST00000533492 EFHC1Q5JVL4 640 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 SMYD5Q6GMV2 418 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 KIAA0907Q7Z7F0 614 aaPredicted RBP16.02■□□□□ 0.16
CPSF1-211ENST00000533492 CACUL1Q86Y37 369 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 PASD1Q8IV76 773 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 CARNMT1Q8N4J0 409 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 OR2T3Q8NH03 318 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 FIBINQ8TAL6 211 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 PPP1R13BQ96KQ4 1090 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 TUBGCP2Q9BSJ2 902 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 NUP58Q9BVL2 599 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 GTPBP2Q9BX10 602 aaKnown RBP16.02■□□□□ 0.16
CPSF1-211ENST00000533492 GPR174Q9BXC1 333 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 NUCKS1Q9H1E3 243 aaKnown RBP16.02■□□□□ 0.16
CPSF1-211ENST00000533492 USP36Q9P275 1121 aaKnown RBP16.02■□□□□ 0.16
CPSF1-211ENST00000533492 TJP2Q9UDY2 1190 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 SUSD2Q9UGT4 822 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 SUN2Q9UH99 717 aa16.02■□□□□ 0.16
CPSF1-211ENST00000533492 MEI4A8MW99 385 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 FOXN3O00409 490 aaPredicted RBP16.01■□□□□ 0.15
CPSF1-211ENST00000533492 SYPP08247 313 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 COPAP53621 1224 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 BPIFB4P59827 614 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 ST8SIA6P61647 398 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 RPS24P62847 133 aaKnown RBP16.01■□□□□ 0.15
CPSF1-211ENST00000533492 CDK17Q00537 523 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 CAMK2GQ13555 558 aaPredicted RBP16.01■□□□□ 0.15
CPSF1-211ENST00000533492 CDH18Q13634 790 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 MS4A13Q5J8X5 152 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 SH3PXD2AQ5TCZ1 1133 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 OR6B2Q6IFH4 312 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 CHSY1Q86X52 802 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 CFAP52Q8N1V2 620 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 HDDC3Q8N4P3 179 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 ZNF366Q8N895 744 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 ATP6V0D2Q8N8Y2 350 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 WFDC5Q8TCV5 224 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 RNF34Q969K3 372 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 BTN2A3PQ96KV6 586 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 CNTNAP3BQ96NU0 1288 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 CNTNAP3Q9BZ76 1288 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 LHX5Q9H2C1 402 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 PDCL3Q9H2J4 239 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 TMEM245Q9H330 911 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 SYNCQ9H7C4 482 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 SIX2Q9NPC8 291 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.01■□□□□ 0.15
CPSF1-211ENST00000533492 PCDHGC3Q9UN70 934 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 CEP83Q9Y592 693 aa16.01■□□□□ 0.15
CPSF1-211ENST00000533492 KCNJ18B7U540 433 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 H0Y626 953 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 MOCS3O95396 460 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 GLI1P08151 1106 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 SLC2A3P11169 496 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 MAOBP27338 520 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 TAF5Q15542 800 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 PTPRNQ16849 979 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 PLEKHG6Q3KR16 790 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 RAP1GAP2Q684P5 730 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 FAM124AQ86V42 546 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 LGI2Q8N0V4 545 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 DEFB106AQ8N104 65 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 WDTC1Q8N5D0 677 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 CADM4Q8NFZ8 388 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 PRICKLE1Q96MT3 831 aaPredicted RBP16■□□□□ 0.15
CPSF1-211ENST00000533492 CPXM1Q96SM3 734 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 FAM204AQ9H8W3 233 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 FBRSQ9HAH7 460 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 CAPN10Q9HC96 672 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 FSCN3Q9NQT6 498 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 KIAA1522Q9P206 1035 aaPredicted RBP16■□□□□ 0.15
CPSF1-211ENST00000533492 CKAP5Q14008 2032 aa16■□□□□ 0.15
CPSF1-211ENST00000533492 SYNJ2BP-COX16A0A087WUM0 186 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 ARHGAP33O14559 1287 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 HSF2BPO75031 334 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 GRAP2O75791 330 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 LUC7L3O95232 432 aaKnown RBP15.99■□□□□ 0.15
CPSF1-211ENST00000533492 ASLP04424 464 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 CEACAM1P13688 526 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 CSRP1P21291 193 aaKnown RBP15.99■□□□□ 0.15
CPSF1-211ENST00000533492 ABCB4P21439 1286 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 TACR2P21452 398 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 CLCN1P35523 988 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 CSKP41240 450 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 RAPGEF1Q13905 1077 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 KCNJ12Q14500 433 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 CT47A1Q5JQC4 288 aaPredicted RBP15.99■□□□□ 0.15
CPSF1-211ENST00000533492 C11orf57Q6ZUT1 292 aaPredicted RBP15.99■□□□□ 0.15
CPSF1-211ENST00000533492 SLC47A2Q86VL8 602 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 C1orf131Q8NDD1 294 aaKnown RBP15.99■□□□□ 0.15
CPSF1-211ENST00000533492 TTC17Q96AE7 1141 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 MYEOVQ96EZ4 313 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 MIR1-1HGQ9H1L0 117 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 SLC32A1Q9H598 525 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 PRSS16Q9NQE7 514 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 ASNSD1Q9NWL6 643 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 DDIT4Q9NX09 232 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 COX16Q9P0S2 106 aa15.99■□□□□ 0.15
CPSF1-211ENST00000533492 XPO7Q9UIA9 1087 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms