RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 CD59P13987 128 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 GPD2P43304 727 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 ACADSBP45954 432 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 RING1Q06587 406 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 CAMK2GQ13555 558 aaPredicted RBP18.5■□□□□ 0.55
PCF11-206ENST00000533018 FAM133BQ5BKY9 247 aaKnown RBP18.5■□□□□ 0.55
PCF11-206ENST00000533018 MPP7Q5T2T1 576 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 FOXR2Q6PJQ5 311 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 CARNMT1Q8N4J0 409 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.5■□□□□ 0.55
PCF11-206ENST00000533018 ZNF557Q8N988 423 aaPredicted RBP18.5■□□□□ 0.55
PCF11-206ENST00000533018 HJURPQ8NCD3 748 aaPredicted RBP18.5■□□□□ 0.55
PCF11-206ENST00000533018 WFDC5Q8TCV5 224 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 DQX1Q8TE96 717 aaKnown RBP18.5■□□□□ 0.55
PCF11-206ENST00000533018 CAMK1GQ96NX5 476 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 CRACR2AQ9BSW2 395 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 ZDHHC5Q9C0B5 715 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 NFE2L3Q9Y4A8 694 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 IGF2RP11717 2491 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 KNL1Q8NG31 2342 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 SPEGQ15772 3267 aa18.5■□□□□ 0.55
PCF11-206ENST00000533018 BCAT2O15382 392 aaPredicted RBP18.49■□□□□ 0.55
PCF11-206ENST00000533018 SART1O43290 800 aaKnown RBP18.49■□□□□ 0.55
PCF11-206ENST00000533018 THAP12O43422 761 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 SH3BP5O60239 455 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 IGLV3-19P01714 112 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 USP8P40818 1118 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 MARSP56192 900 aaKnown RBP18.49■□□□□ 0.55
PCF11-206ENST00000533018 ST8SIA6P61647 398 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 FAM193AP78312 1265 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 SLC14A1Q13336 389 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 PTPRNQ16849 979 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 NADSYN1Q6IA69 706 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 DENND1BQ6P3S1 775 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 AZIN2Q96A70 460 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 FCRL2Q96LA5 508 aaPredicted RBP18.49■□□□□ 0.55
PCF11-206ENST00000533018 IRX2Q9BZI1 471 aaPredicted RBP18.49■□□□□ 0.55
PCF11-206ENST00000533018 PRSS16Q9NQE7 514 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 SUN2Q9UH99 717 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 WASF3Q9UPY6 502 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 TLR6Q9Y2C9 796 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 CHD6Q8TD26 2715 aa18.49■□□□□ 0.55
PCF11-206ENST00000533018 APOEP02649 317 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 FYNP06241 537 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 GNA15P30679 374 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 ACSL1P33121 698 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 RPS24P62847 133 aaKnown RBP18.48■□□□□ 0.55
PCF11-206ENST00000533018 CDH18Q13634 790 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 HNRNPDQ14103 355 aaKnown RBP18.48■□□□□ 0.55
PCF11-206ENST00000533018 CAMK4Q16566 473 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 KIAA0907Q7Z7F0 614 aaPredicted RBP18.48■□□□□ 0.55
PCF11-206ENST00000533018 CFAP52Q8N1V2 620 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 FIBINQ8TAL6 211 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 GANCQ8TET4 914 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 ZNF606Q8WXB4 792 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 TRIM62Q9BVG3 475 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 BTBD1Q9H0C5 482 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 FBRSQ9HAH7 460 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 CEP83Q9Y592 693 aa18.48■□□□□ 0.55
PCF11-206ENST00000533018 E5RJQ4 531 aa18.47■□□□□ 0.55
PCF11-206ENST00000533018 H0Y626 953 aa18.47■□□□□ 0.55
PCF11-206ENST00000533018 RPS14P62263 151 aaKnown RBP18.47■□□□□ 0.55
PCF11-206ENST00000533018 TRIP6Q15654 476 aaKnown RBP18.47■□□□□ 0.55
PCF11-206ENST00000533018 ARHGAP44Q17R89 818 aa18.47■□□□□ 0.55
PCF11-206ENST00000533018 TTC31Q49AM3 519 aaPredicted RBP18.47■□□□□ 0.55
PCF11-206ENST00000533018 SYPL2Q5VXT5 272 aa18.47■□□□□ 0.55
PCF11-206ENST00000533018 TAC4Q86UU9 113 aa18.47■□□□□ 0.55
PCF11-206ENST00000533018 NAXDQ8IW45 347 aa18.47■□□□□ 0.55
PCF11-206ENST00000533018 SETD7Q8WTS6 366 aaKnown RBP18.47■□□□□ 0.55
PCF11-206ENST00000533018 PRICKLE1Q96MT3 831 aaPredicted RBP18.47■□□□□ 0.55
PCF11-206ENST00000533018 MED15Q96RN5 788 aa18.47■□□□□ 0.55
PCF11-206ENST00000533018 NUCKS1Q9H1E3 243 aaKnown RBP18.47■□□□□ 0.55
PCF11-206ENST00000533018 C6orf106Q9H6K1 298 aaPredicted RBP18.47■□□□□ 0.55
PCF11-206ENST00000533018 GAREM1Q9H706 876 aa18.47■□□□□ 0.55
PCF11-206ENST00000533018 ACP6Q9NPH0 428 aa18.47■□□□□ 0.55
PCF11-206ENST00000533018 TJP2Q9UDY2 1190 aa18.47■□□□□ 0.55
PCF11-206ENST00000533018 ZMIZ1Q9ULJ6 1067 aa18.47■□□□□ 0.55
PCF11-206ENST00000533018 CNTN6Q9UQ52 1028 aa18.47■□□□□ 0.55
PCF11-206ENST00000533018 MUC22E2RYF6 1773 aaPredicted RBP18.47■□□□□ 0.55
PCF11-206ENST00000533018 RNASEH1O60930 286 aaKnown RBP18.46■□□□□ 0.55
PCF11-206ENST00000533018 FSBPO95073 299 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 TRIM16O95361 564 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 MOCS3O95396 460 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 SEMA4FO95754 770 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 CER1O95813 267 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 CSKP41240 450 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 MATKP42679 507 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 CSNK1EP49674 416 aaKnown RBP18.46■□□□□ 0.55
PCF11-206ENST00000533018 ZBTB16Q05516 673 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 MS4A13Q5J8X5 152 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 ZNF776Q68DI1 518 aaPredicted RBP18.46■□□□□ 0.55
PCF11-206ENST00000533018 GJB7Q6PEY0 223 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 IL27RAQ6UWB1 636 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 ENOSF1Q7L5Y1 443 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 LGI2Q8N0V4 545 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 CHCHD4Q8N4Q1 142 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 STK32AQ8WU08 396 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 MYEOVQ96EZ4 313 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 PCED1AQ9H1Q7 454 aa18.46■□□□□ 0.55
PCF11-206ENST00000533018 MTG2Q9H4K7 406 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms