RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 DPP6P42658 865 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 LIMK1P53667 647 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 RPS24P62847 133 aaKnown RBP17.86■□□□□ 0.45
PHRF1-204ENST00000532550 FNDC3BQ53EP0 1204 aaKnown RBP17.86■□□□□ 0.45
PHRF1-204ENST00000532550 LYSMD4Q5XG99 296 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 MBLAC2Q68D91 279 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 TCEAL6Q6IPX3 200 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 ADIPOR2Q86V24 386 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 TMPRSS6Q8IU80 811 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 ZDHHC17Q8IUH5 632 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 CARNMT1Q8N4J0 409 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 DEFB119Q8N690 84 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 CYB5D2Q8WUJ1 264 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 TCEAL3Q969E4 200 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 NUCKS1Q9H1E3 243 aaKnown RBP17.86■□□□□ 0.45
PHRF1-204ENST00000532550 RXFP3Q9NSD7 469 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 DDIT4Q9NX09 232 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 COX16Q9P0S2 106 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 CEP192Q8TEP8 1941 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 PI4KAP42356 2102 aa17.86■□□□□ 0.45
PHRF1-204ENST00000532550 KCNU1A8MYU2 1149 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 CACNA1AO00555 2505 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 TACR2P21452 398 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 CCR1P32246 355 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 CD70P32970 193 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 NOS2P35228 1153 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 PTGER3P43115 390 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 PITX1P78337 314 aaPredicted RBP17.85■□□□□ 0.45
PHRF1-204ENST00000532550 MYL5Q02045 173 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 PTPN20Q4JDL3 420 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 TAF3Q5VWG9 929 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 RAP1GAP2Q684P5 730 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 RNF43Q68DV7 783 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 OLFML1Q6UWY5 402 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 METTL3Q86U44 580 aaKnown RBP17.85■□□□□ 0.45
PHRF1-204ENST00000532550 CHSY1Q86X52 802 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 ERICH1Q86X53 443 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 SYT12Q8IV01 421 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 LGI2Q8N0V4 545 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 CFAP52Q8N1V2 620 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 WFDC5Q8TCV5 224 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 PRCCQ92733 491 aaPredicted RBP17.85■□□□□ 0.45
PHRF1-204ENST00000532550 C18orf8Q96DM3 657 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 SIPA1Q96FS4 1042 aa17.85■□□□□ 0.45
PHRF1-204ENST00000532550 PCMTD1Q96MG8 357 aaPredicted RBP17.85■□□□□ 0.45
PHRF1-204ENST00000532550 XPO7Q9UIA9 1087 aaKnown RBP17.85■□□□□ 0.45
PHRF1-204ENST00000532550 SPTBN2O15020 2390 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 F5H5T6 163 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 F8VZ95 297 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 H0Y626 953 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 DLDP09622 509 aaKnown RBP17.84■□□□□ 0.45
PHRF1-204ENST00000532550 ACADMP11310 421 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 HLA-EP13747 358 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 PRKCHP24723 683 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 CDH5P33151 784 aaPredicted RBP17.84■□□□□ 0.45
PHRF1-204ENST00000532550 COPB1P53618 953 aaKnown RBP17.84■□□□□ 0.45
PHRF1-204ENST00000532550 RNASE9P60153 205 aaKnown RBP17.84■□□□□ 0.45
PHRF1-204ENST00000532550 POLR2FP61218 127 aaKnown RBP17.84■□□□□ 0.45
PHRF1-204ENST00000532550 ZNF33AQ06730 810 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 NME3Q13232 169 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 EIF4EBP2Q13542 120 aaPredicted RBP17.84■□□□□ 0.45
PHRF1-204ENST00000532550 CDH18Q13634 790 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 STPG1Q5TH74 334 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 SLC26A9Q7LBE3 791 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 ZNF397Q8NF99 534 aaPredicted RBP17.84■□□□□ 0.45
PHRF1-204ENST00000532550 PRICKLE1Q96MT3 831 aaPredicted RBP17.84■□□□□ 0.45
PHRF1-204ENST00000532550 MKRN2Q9H000 416 aaKnown RBP17.84■□□□□ 0.45
PHRF1-204ENST00000532550 TMEM245Q9H330 911 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 ITM2CQ9NQX7 267 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 FAM207AQ9NSI2 230 aaPredicted RBP17.84■□□□□ 0.45
PHRF1-204ENST00000532550 RRN3Q9NYV6 651 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 SUN2Q9UH99 717 aa17.84■□□□□ 0.45
PHRF1-204ENST00000532550 CNOT1A5YKK6 2376 aaKnown RBP17.83■□□□□ 0.45
PHRF1-204ENST00000532550 DAB1O75553 588 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 MOCS3O95396 460 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 ITPKAP23677 461 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 CD6P30203 668 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 OXTRP30559 389 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 KLK7P49862 253 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 ST8SIA6P61647 398 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 LMAN2Q12907 356 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 MTA1Q13330 715 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 NOP9Q86U38 636 aaKnown RBP17.83■□□□□ 0.44
PHRF1-204ENST00000532550 MSANTD4Q8NCY6 345 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 DDX1Q92499 740 aaKnown RBP17.83■□□□□ 0.44
PHRF1-204ENST00000532550 TTC17Q96AE7 1141 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 MYEOVQ96EZ4 313 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 NUSAP1Q9BXS6 441 aaKnown RBP17.83■□□□□ 0.44
PHRF1-204ENST00000532550 NAT10Q9H0A0 1025 aaKnown RBP17.83■□□□□ 0.44
PHRF1-204ENST00000532550 GANQ9H2C0 597 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 TMEM74BQ9NUR3 256 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.83■□□□□ 0.44
PHRF1-204ENST00000532550 KIAA1522Q9P206 1035 aaPredicted RBP17.83■□□□□ 0.44
PHRF1-204ENST00000532550 LIMA1Q9UHB6 759 aaKnown RBP17.83■□□□□ 0.44
PHRF1-204ENST00000532550 DAAM1Q9Y4D1 1078 aa17.83■□□□□ 0.44
PHRF1-204ENST00000532550 PATE3B3GLJ2 98 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 M0QYT0 321 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 GFPT2O94808 682 aa17.82■□□□□ 0.44
PHRF1-204ENST00000532550 LUC7L3O95232 432 aaKnown RBP17.82■□□□□ 0.44
PHRF1-204ENST00000532550 LSM8O95777 96 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms