RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 CD27P26842 260 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 CD70P32970 193 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 GRK6P43250 576 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 SLC8A3P57103 927 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 KRT85P78386 507 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 DPYDQ12882 1025 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 ZCWPW2Q504Y3 356 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 MBLAC2Q68D91 279 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 AHI1Q8N157 1196 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 TTC39CQ8N584 583 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 UBA3Q8TBC4 463 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 RNF139Q8WU17 664 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 CRELD1Q96HD1 420 aa18.04■□□□□ 0.48
PKP3-208ENST00000531857 GOLGA6L7A0A1B0GV03 622 aa18.03■□□□□ 0.48
PKP3-208ENST00000531857 PCDHGA12O60330 932 aa18.03■□□□□ 0.48
PKP3-208ENST00000531857 LETM1O95202 739 aaPredicted RBP18.03■□□□□ 0.48
PKP3-208ENST00000531857 IGHV4-34P06331 123 aa18.03■□□□□ 0.48
PKP3-208ENST00000531857 DLDP09622 509 aaKnown RBP18.03■□□□□ 0.48
PKP3-208ENST00000531857 CTSKP43235 329 aa18.03■□□□□ 0.48
PKP3-208ENST00000531857 MXI1P50539 228 aa18.03■□□□□ 0.48
PKP3-208ENST00000531857 CCT8P50990 548 aa18.03■□□□□ 0.48
PKP3-208ENST00000531857 NDUFA8P51970 172 aa18.03■□□□□ 0.48
PKP3-208ENST00000531857 SMAD1Q15797 465 aaKnown RBP18.03■□□□□ 0.48
PKP3-208ENST00000531857 RFWD3Q6PCD5 774 aa18.03■□□□□ 0.48
PKP3-208ENST00000531857 DHRS13Q6UX07 377 aa18.03■□□□□ 0.48
PKP3-208ENST00000531857 GUF1Q8N442 669 aaKnown RBP18.03■□□□□ 0.48
PKP3-208ENST00000531857 LRRC4Q9HBW1 653 aa18.03■□□□□ 0.48
PKP3-208ENST00000531857 DOCK9Q9BZ29 2069 aa18.03■□□□□ 0.48
PKP3-208ENST00000531857 GOLGA6L3A6NEY3 463 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 GABBR2O75899 941 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 SLC6A4P31645 630 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 SYKP43405 635 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 BCAT1P54687 386 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 ZNF445P59923 1031 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 ZBTB16Q05516 673 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 BST2Q10589 180 aaKnown RBP18.02■□□□□ 0.48
PKP3-208ENST00000531857 CBWD6Q4V339 395 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 CBWD3Q5JTY5 395 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 CBWD5Q5RIA9 395 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 PRAMEF14Q5SWL7 426 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 CCDC47Q96A33 483 aaKnown RBP18.02■□□□□ 0.48
PKP3-208ENST00000531857 MYO19Q96H55 970 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 FBRSQ9HAH7 460 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 SGK2Q9HBY8 427 aa18.02■□□□□ 0.48
PKP3-208ENST00000531857 KNTC1P50748 2209 aa18.02■□□□□ 0.47
PKP3-208ENST00000531857 ASXL3Q9C0F0 2248 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 TBL1XO60907 577 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 LATS1O95835 1130 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 ATP5BP06576 529 aaKnown RBP18.01■□□□□ 0.47
PKP3-208ENST00000531857 LCP1P13796 627 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 POLR2EP19388 210 aaKnown RBP18.01■□□□□ 0.47
PKP3-208ENST00000531857 UBE2HP62256 183 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 TTC31Q49AM3 519 aaPredicted RBP18.01■□□□□ 0.47
PKP3-208ENST00000531857 SGO2Q562F6 1265 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 FAM133BQ5BKY9 247 aaKnown RBP18.01■□□□□ 0.47
PKP3-208ENST00000531857 PIK3R6Q5UE93 754 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 ZNF776Q68DI1 518 aaPredicted RBP18.01■□□□□ 0.47
PKP3-208ENST00000531857 KIAA0895LQ68EN5 471 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 ADAT2Q7Z6V5 191 aaKnown RBP18.01■□□□□ 0.47
PKP3-208ENST00000531857 SMYD4Q8IYR2 804 aaPredicted RBP18.01■□□□□ 0.47
PKP3-208ENST00000531857 SIX6OS1Q8N1H7 587 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 PDCD7Q8N8D1 485 aaKnown RBP18.01■□□□□ 0.47
PKP3-208ENST00000531857 LMLNQ96KR4 655 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 RSPH9Q9H1X1 276 aaPredicted RBP18.01■□□□□ 0.47
PKP3-208ENST00000531857 EBF2Q9HAK2 575 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 ABCC13Q9NSE7 274 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 SERGEFQ9UGK8 458 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 SUN2Q9UH99 717 aa18.01■□□□□ 0.47
PKP3-208ENST00000531857 A0A087WV48 116 aa18■□□□□ 0.47
PKP3-208ENST00000531857 FAM47DPA6NHR8 397 aa18■□□□□ 0.47
PKP3-208ENST00000531857 CBX4O00257 560 aa18■□□□□ 0.47
PKP3-208ENST00000531857 PIK3R2O00459 728 aa18■□□□□ 0.47
PKP3-208ENST00000531857 IGLV3-27P01718 113 aa18■□□□□ 0.47
PKP3-208ENST00000531857 CD19P15391 556 aa18■□□□□ 0.47
PKP3-208ENST00000531857 CLDN6P56747 220 aa18■□□□□ 0.47
PKP3-208ENST00000531857 DAOAP59103 153 aa18■□□□□ 0.47
PKP3-208ENST00000531857 CUL2Q13617 745 aa18■□□□□ 0.47
PKP3-208ENST00000531857 EDRF1Q3B7T1 1238 aa18■□□□□ 0.47
PKP3-208ENST00000531857 GATAD2AQ86YP4 633 aa18■□□□□ 0.47
PKP3-208ENST00000531857 SCUBE3Q8IX30 993 aa18■□□□□ 0.47
PKP3-208ENST00000531857 KCTD13Q8WZ19 329 aa18■□□□□ 0.47
PKP3-208ENST00000531857 GOLGA1Q92805 767 aa18■□□□□ 0.47
PKP3-208ENST00000531857 MYEOVQ96EZ4 313 aa18■□□□□ 0.47
PKP3-208ENST00000531857 SLC6A18Q96N87 628 aa18■□□□□ 0.47
PKP3-208ENST00000531857 PABPC3Q9H361 631 aaKnown RBP18■□□□□ 0.47
PKP3-208ENST00000531857 STIM2Q9P246 746 aa18■□□□□ 0.47
PKP3-208ENST00000531857 HESX1Q9UBX0 185 aa18■□□□□ 0.47
PKP3-208ENST00000531857 FTSJ1Q9UET6 329 aa18■□□□□ 0.47
PKP3-208ENST00000531857 FAM237AA0A1B0GTK4 181 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 A0A1B0GTQ1 180 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 A0A1W2PPC4 97 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 O00370 1275 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 VILLO15195 856 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 PAPSS1O43252 624 aaPredicted RBP17.99■□□□□ 0.47
PKP3-208ENST00000531857 STX10O60499 249 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 SIN3BO75182 1162 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 WNT1P04628 370 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 RGS7P49802 495 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 GALCP54803 685 aa17.99■□□□□ 0.47
PKP3-208ENST00000531857 RACK1P63244 317 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms