RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 PTPN1P18031 435 aaKnown RBP17.32■□□□□ 0.36
VPS26B-206ENST00000531741 MGAT1P26572 445 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 PTDSS1P48651 473 aaKnown RBP17.32■□□□□ 0.36
VPS26B-206ENST00000531741 AQP5P55064 265 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 SCAPQ12770 1279 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 MFSD10Q14728 455 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 FAM110CQ1W6H9 321 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 FASTKD1Q53R41 847 aaKnown RBP17.32■□□□□ 0.36
VPS26B-206ENST00000531741 MBLAC2Q68D91 279 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 RFX8Q6ZV50 586 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 PAQR9Q6ZVX9 377 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 NPLOC4Q8TAT6 608 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 KCNV2Q8TDN2 545 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 DNAJB3Q8WWF6 145 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 MIEF2Q96C03 454 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 C20orf27Q9GZN8 174 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 PRDM12Q9H4Q4 367 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 RNF19AQ9NV58 838 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 EMCNQ9ULC0 261 aa17.32■□□□□ 0.36
VPS26B-206ENST00000531741 CCDC195A0A1B0GUA6 201 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 C9IYK1 514 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 DYNC1LI2O43237 492 aaPredicted RBP17.31■□□□□ 0.36
VPS26B-206ENST00000531741 PLIN3O60664 434 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 PSMB4P28070 264 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 HCAR3P49019 387 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 CRYBB1P53674 252 aaPredicted RBP17.31■□□□□ 0.36
VPS26B-206ENST00000531741 GJA9P57773 515 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 PDE1CQ14123 709 aaPredicted RBP17.31■□□□□ 0.36
VPS26B-206ENST00000531741 NAA25Q14CX7 972 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 SPANXN3Q5MJ09 141 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 PDZD4Q76G19 769 aaPredicted RBP17.31■□□□□ 0.36
VPS26B-206ENST00000531741 UNC5BQ8IZJ1 945 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 ZNF567Q8N184 647 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 ISL2Q96A47 359 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 CCDC106Q9BWC9 280 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 GOLGA2P5Q9HBQ8 144 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 LRRC4Q9HBW1 653 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 ARMCX1Q9P291 453 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 PPARGC1AQ9UBK2 798 aaKnown RBP17.31■□□□□ 0.36
VPS26B-206ENST00000531741 TAGLN3Q9UI15 199 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 IPPQ9Y573 584 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 NR2E3Q9Y5X4 410 aa17.31■□□□□ 0.36
VPS26B-206ENST00000531741 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 M0QYT0 321 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 EEF2KO00418 725 aaKnown RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 TPP1O14773 563 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 NCAM2O15394 837 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 POLBP06746 335 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 ITGA2BP08514 1039 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 SESN2P58004 480 aaPredicted RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 PITX1P78337 314 aaPredicted RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 DEUP1Q05D60 604 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 SEMA3BQ13214 749 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 HIC1Q14526 733 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 CLEC20AQ6ZU45 233 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 TREML1Q86YW5 311 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 SIX6OS1Q8N1H7 587 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 PLCD3Q8N3E9 789 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 SMG8Q8ND04 991 aaKnown RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 BRD8Q9H0E9 1235 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 C1orf21Q9H246 121 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 FAM96AQ9H5X1 160 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 F8W8V4 182 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 BEST1O76090 585 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 FGF3P11487 239 aaPredicted RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 ATP6V1C1P21283 382 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 GRK2P25098 689 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 GP5P40197 560 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 CRADDP78560 199 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 IFRD2Q12894 506 aaPredicted RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 ACSBG2Q5FVE4 666 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 INTS6LQ5JSJ4 861 aaKnown RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 N4BP2L1Q5TBK1 243 aaPredicted RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 WDR75Q8IWA0 830 aaKnown RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 PIWIL2Q8TC59 973 aaKnown RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 NDRG1Q92597 394 aaKnown RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 PGAP3Q96FM1 320 aaPredicted RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 PARK7Q99497 189 aaKnown RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 CPNE1Q99829 537 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 ZNF395Q9H8N7 513 aaPredicted RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 PIGVQ9NUD9 493 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 SYBUQ9NX95 663 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 ADAM28Q9UKQ2 775 aa17.3■□□□□ 0.36
VPS26B-206ENST00000531741 MYO18AQ92614 2054 aaKnown RBP17.3■□□□□ 0.36
VPS26B-206ENST00000531741 SERPINE1P05121 402 aa17.29■□□□□ 0.36
VPS26B-206ENST00000531741 ACADSP16219 412 aa17.29■□□□□ 0.36
VPS26B-206ENST00000531741 AOC1P19801 751 aa17.29■□□□□ 0.36
VPS26B-206ENST00000531741 ADRA1BP35368 520 aa17.29■□□□□ 0.36
VPS26B-206ENST00000531741 MAGEA12P43365 314 aa17.29■□□□□ 0.36
VPS26B-206ENST00000531741 KPNB1Q14974 876 aaKnown RBP17.29■□□□□ 0.36
VPS26B-206ENST00000531741 DNAL1Q4LDG9 190 aa17.29■□□□□ 0.36
VPS26B-206ENST00000531741 TEDDM1Q5T9Z0 273 aa17.29■□□□□ 0.36
VPS26B-206ENST00000531741 GRTP1Q5TC63 336 aa17.29■□□□□ 0.36
VPS26B-206ENST00000531741 SYPL2Q5VXT5 272 aa17.29■□□□□ 0.36
VPS26B-206ENST00000531741 NME8Q8N427 588 aa17.29■□□□□ 0.36
VPS26B-206ENST00000531741 ARRDC4Q8NCT1 418 aa17.29■□□□□ 0.36
VPS26B-206ENST00000531741 CCNYQ8ND76 341 aa17.29■□□□□ 0.36
VPS26B-206ENST00000531741 PGBD4Q96DM1 585 aa17.29■□□□□ 0.36
VPS26B-206ENST00000531741 PPP1R10Q96QC0 940 aaKnown RBP17.29■□□□□ 0.36
VPS26B-206ENST00000531741 ERI2A8K979 691 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms