RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 POLR2EP19388 210 aaKnown RBP17.47■□□□□ 0.39
CPSF1-207ENST00000531727 SIM1P81133 766 aaPredicted RBP17.47■□□□□ 0.39
CPSF1-207ENST00000531727 GRIK2Q13002 908 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 UNQ6494/PRO21346Q6UXR6 183 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 BEND5Q7L4P6 421 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 ENOSF1Q7L5Y1 443 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 FAM124AQ86V42 546 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 MFN1Q8IWA4 741 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 ZCCHC9Q8N567 271 aaKnown RBP17.47■□□□□ 0.39
CPSF1-207ENST00000531727 STK32AQ8WU08 396 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 FAM149B1Q96BN6 582 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 SLC39A13Q96H72 371 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 LMLNQ96KR4 655 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 TRIM62Q9BVG3 475 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 SCNM1Q9BWG6 230 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 SLC4A5Q9BY07 1137 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 MIR1-1HGQ9H1L0 117 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 PRSS16Q9NQE7 514 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 STIM2Q9P246 746 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 NAALADL1Q9UQQ1 740 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 FRYQ5TBA9 3013 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 CACNA1BQ00975 2339 aa17.47■□□□□ 0.39
CPSF1-207ENST00000531727 TYW5A2RUC4 315 aaKnown RBP17.46■□□□□ 0.39
CPSF1-207ENST00000531727 C1QTNF9BB2RNN3 333 aa17.46■□□□□ 0.39
CPSF1-207ENST00000531727 LETM1O95202 739 aaPredicted RBP17.46■□□□□ 0.39
CPSF1-207ENST00000531727 C1QTNF9P0C862 333 aa17.46■□□□□ 0.39
CPSF1-207ENST00000531727 RPS14P62263 151 aaKnown RBP17.46■□□□□ 0.39
CPSF1-207ENST00000531727 ZBTB16Q05516 673 aa17.46■□□□□ 0.39
CPSF1-207ENST00000531727 HNRNPDQ14103 355 aaKnown RBP17.46■□□□□ 0.39
CPSF1-207ENST00000531727 FIBINQ8TAL6 211 aa17.46■□□□□ 0.39
CPSF1-207ENST00000531727 ZNF606Q8WXB4 792 aa17.46■□□□□ 0.39
CPSF1-207ENST00000531727 MYEOVQ96EZ4 313 aa17.46■□□□□ 0.39
CPSF1-207ENST00000531727 TMEM121BQ9BXQ6 578 aaPredicted RBP17.46■□□□□ 0.39
CPSF1-207ENST00000531727 KIAA1468Q9P260 1216 aa17.46■□□□□ 0.39
CPSF1-207ENST00000531727 SUN2Q9UH99 717 aa17.46■□□□□ 0.39
CPSF1-207ENST00000531727 CYTH4Q9UIA0 394 aa17.46■□□□□ 0.39
CPSF1-207ENST00000531727 RWDD2AQ9UIY3 292 aa17.46■□□□□ 0.39
CPSF1-207ENST00000531727 BCAT2O15382 392 aaPredicted RBP17.45■□□□□ 0.38
CPSF1-207ENST00000531727 THAP12O43422 761 aa17.45■□□□□ 0.38
CPSF1-207ENST00000531727 GNA15P30679 374 aa17.45■□□□□ 0.38
CPSF1-207ENST00000531727 RPS24P62847 133 aaKnown RBP17.45■□□□□ 0.38
CPSF1-207ENST00000531727 FAM193AP78312 1265 aa17.45■□□□□ 0.38
CPSF1-207ENST00000531727 MS4A13Q5J8X5 152 aa17.45■□□□□ 0.38
CPSF1-207ENST00000531727 SYPL2Q5VXT5 272 aa17.45■□□□□ 0.38
CPSF1-207ENST00000531727 TRIM65Q6PJ69 517 aa17.45■□□□□ 0.38
CPSF1-207ENST00000531727 TMEM110Q86TL2 294 aa17.45■□□□□ 0.38
CPSF1-207ENST00000531727 TAC4Q86UU9 113 aa17.45■□□□□ 0.38
CPSF1-207ENST00000531727 ADAM32Q8TC27 787 aa17.45■□□□□ 0.38
CPSF1-207ENST00000531727 TTC17Q96AE7 1141 aa17.45■□□□□ 0.38
CPSF1-207ENST00000531727 FAM81BQ96LP2 452 aa17.45■□□□□ 0.38
CPSF1-207ENST00000531727 NUCKS1Q9H1E3 243 aaKnown RBP17.45■□□□□ 0.38
CPSF1-207ENST00000531727 EIF2B4Q9UI10 523 aaKnown RBP17.45■□□□□ 0.38
CPSF1-207ENST00000531727 USP24Q9UPU5 2620 aa17.45■□□□□ 0.38
CPSF1-207ENST00000531727 E5RJQ4 531 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 CAPN9O14815 690 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 PAPSS1O43252 624 aaPredicted RBP17.44■□□□□ 0.38
CPSF1-207ENST00000531727 HYAL3O43820 417 aaPredicted RBP17.44■□□□□ 0.38
CPSF1-207ENST00000531727 SH3BP5O60239 455 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 MOCS2O96007 188 aaPredicted RBP17.44■□□□□ 0.38
CPSF1-207ENST00000531727 DNTTP04053 509 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 ASLP04424 464 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 ACSL1P33121 698 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 ZNF776Q68DI1 518 aaPredicted RBP17.44■□□□□ 0.38
CPSF1-207ENST00000531727 NAXDQ8IW45 347 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 C1orf216Q8TAB5 229 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 MYO19Q96H55 970 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 CAMK1GQ96NX5 476 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 MED15Q96RN5 788 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 CRACR2AQ9BSW2 395 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 C6orf106Q9H6K1 298 aaPredicted RBP17.44■□□□□ 0.38
CPSF1-207ENST00000531727 POPDC2Q9HBU9 364 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 ACP6Q9NPH0 428 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 INTS6Q9UL03 887 aaKnown RBP17.44■□□□□ 0.38
CPSF1-207ENST00000531727 NEUROG3Q9Y4Z2 214 aa17.44■□□□□ 0.38
CPSF1-207ENST00000531727 ZFHX4Q86UP3 3567 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 BECN2A8MW95 431 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 H0Y626 953 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 TRIM16O95361 564 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 IGLV3-25P01717 112 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 APOEP02649 317 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 SLC9A1P19634 815 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 RDXP35241 583 aaKnown RBP17.43■□□□□ 0.38
CPSF1-207ENST00000531727 CSKP41240 450 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 ST8SIA6P61647 398 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 YWHAZP63104 245 aaKnown RBP17.43■□□□□ 0.38
CPSF1-207ENST00000531727 BNC1Q01954 994 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 PDCLQ13371 301 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 CDH18Q13634 790 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 TTC31Q49AM3 519 aaPredicted RBP17.43■□□□□ 0.38
CPSF1-207ENST00000531727 DCAF6Q58WW2 860 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 FSCBQ5H9T9 825 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 GJB7Q6PEY0 223 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 IL27RAQ6UWB1 636 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 GBP6Q6ZN66 633 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 CCDC117Q8IWD4 279 aaPredicted RBP17.43■□□□□ 0.38
CPSF1-207ENST00000531727 CFAP52Q8N1V2 620 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 CARNMT1Q8N4J0 409 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 SNX19Q92543 992 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 GATA6Q92908 595 aa17.43■□□□□ 0.38
CPSF1-207ENST00000531727 BTBD1Q9H0C5 482 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms