RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 BTBD3Q9Y2F9 522 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 KCNK3O14649 394 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 SEMA4FO95754 770 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 LATS1O95835 1130 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 DLDP09622 509 aaKnown RBP19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 ATXN1LP0C7T5 689 aaKnown RBP19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 FKBP3Q00688 224 aaKnown RBP19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 FAM133BQ5BKY9 247 aaKnown RBP19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 ZNF658Q5TYW1 1059 aaPredicted RBP19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 PIK3R6Q5UE93 754 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 PMF1Q6P1K2 205 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 MSANTD2Q6P1R3 559 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 C19orf48Q6RUI8 117 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 TMEM270Q6UE05 265 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 MARCH9Q86YJ5 346 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 RHBDD1Q8TEB9 315 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 BIRC7Q96CA5 298 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 ZSWIM1Q9BR11 485 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 TM9SF3Q9HD45 589 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 RMND1Q9NWS8 449 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 STIM2Q9P246 746 aa19.17■□□□□ 0.66
SSSCA1-206ENST00000531405 FLRT2O43155 660 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 FSBPO95073 299 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 IGLV3-27P01718 113 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 DNTTP04053 509 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 TBXAS1P24557 533 aaPredicted RBP19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 KCNT1Q5JUK3 1230 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 LCLAT1Q6UWP7 414 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 DBX2Q6ZNG2 339 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 FMR1NBQ8N0W7 255 aaPredicted RBP19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 SCML4Q8N228 414 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 MDM1Q8TC05 714 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 SLC35F5Q8WV83 523 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 KAT5Q92993 513 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 MYEOVQ96EZ4 313 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 BTBD1Q9H0C5 482 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 ARMCX3Q9UH62 379 aaPredicted RBP19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 ANKRD6Q9Y2G4 727 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 PCDHGB2Q9Y5G2 931 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 ATP6V1DQ9Y5K8 247 aa19.16■□□□□ 0.66
SSSCA1-206ENST00000531405 SMG1Q96Q15 3661 aaKnown RBP19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 M0QYV0 167 aa19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 RNF225M0QZC1 329 aaPredicted RBP19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 ATP5BP06576 529 aaKnown RBP19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 C7P10643 843 aa19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 POLR2EP19388 210 aaKnown RBP19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 BRD2P25440 801 aaKnown RBP19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 NADSYN1Q6IA69 706 aa19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 CCDC34Q96HJ3 373 aa19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 PRICKLE1Q96MT3 831 aaPredicted RBP19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 CCDC86Q9H6F5 360 aaKnown RBP19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 FBRSQ9HAH7 460 aa19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 KIAA1522Q9P206 1035 aaPredicted RBP19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 KIAA1257Q9ULG3 409 aa19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 GPSM3Q9Y4H4 160 aa19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 PCDHB4Q9Y5E5 795 aa19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 MYLKQ15746 1914 aa19.15■□□□□ 0.66
SSSCA1-206ENST00000531405 URB1O60287 2271 aaKnown RBP19.14■□□□□ 0.66
SSSCA1-206ENST00000531405 ACSL4O60488 711 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 LTFP02788 710 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 PAEPP09466 180 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 GRIA4P48058 902 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 SLC11A2P49281 568 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 FMO5P49326 533 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 TBX4P57082 545 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 IL9RQ01113 521 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 ZBTB16Q05516 673 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 TEAD4Q15561 434 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 TTC31Q49AM3 519 aaPredicted RBP19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 COBLL1Q53SF7 1204 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 NUGGCQ68CJ6 796 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 ZNF776Q68DI1 518 aaPredicted RBP19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 MFN1Q8IWA4 741 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 UNC45BQ8IWX7 931 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 IRGQQ8WZA9 623 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 MYO19Q96H55 970 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 LMLNQ96KR4 655 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 MIS12Q9H081 205 aa19.14■□□□□ 0.65
SSSCA1-206ENST00000531405 FAM47DPA6NHR8 397 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 H0Y8X5 98 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 CD27P26842 260 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 RPS24P62847 133 aaKnown RBP19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 LRRC63Q05C16 580 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 MPP7Q5T2T1 576 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 TMPRSS7Q7RTY8 843 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 PPM1KQ8N3J5 372 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 CARNMT1Q8N4J0 409 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 NT5C1BQ96P26 610 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 GSDMAQ96QA5 445 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 CDC6Q99741 560 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 ORAI3Q9BRQ5 295 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 RSPH9Q9H1X1 276 aaPredicted RBP19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 SGK2Q9HBY8 427 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 OSGEPQ9NPF4 335 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 SERGEFQ9UGK8 458 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 SUN2Q9UH99 717 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 INTS6Q9UL03 887 aaKnown RBP19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 KNTC1P50748 2209 aa19.13■□□□□ 0.65
SSSCA1-206ENST00000531405 COL5A1P20908 1838 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms