RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 ZBTB16Q05516 673 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 CETN1Q12798 172 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 COL9A2Q14055 689 aaPredicted RBP16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 PTPRNQ16849 979 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 KIF19Q2TAC6 998 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 MSANTD2Q6P1R3 559 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 LCLAT1Q6UWP7 414 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 GLRX5Q86SX6 157 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 CARNMT1Q8N4J0 409 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 ENGASEQ8NFI3 743 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 CLEC4CQ8WTT0 213 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 IRGQQ8WZA9 623 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 TFAP2BQ92481 460 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 FAM149B1Q96BN6 582 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 GSDMAQ96QA5 445 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 CDC6Q99741 560 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 DDX50Q9BQ39 737 aaKnown RBP16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 TM9SF3Q9HD45 589 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 ST7Q9NRC1 585 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 HOOK1Q9UJC3 728 aaKnown RBP16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 KIAA1257Q9ULG3 409 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 NCKAP1Q9Y2A7 1128 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 ANKRD6Q9Y2G4 727 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 SNX11Q9Y5W9 270 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 PKD1L2Q7Z442 2459 aa16.44■□□□□ 0.22
CHMP4A-204ENST00000530996 FAM221BA6H8Z2 402 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 IRAK2O43187 625 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 ACSL4O60488 711 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 FBXO21O94952 628 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 HOXB3P14651 431 aaPredicted RBP16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 SLC6A4P31645 630 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 GRIA4P48058 902 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 FMO5P49326 533 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 C21orf59P57076 290 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 IL9RQ01113 521 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 INAVAQ3KP66 663 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 PIK3R6Q5UE93 754 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 PMF1Q6P1K2 205 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 SLCO6A1Q86UG4 719 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 ZC3H3Q8IXZ2 948 aaKnown RBP16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 SCML4Q8N228 414 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 UBR7Q8N806 425 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 BIRC7Q96CA5 298 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 PRICKLE1Q96MT3 831 aaPredicted RBP16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 SERPINB11Q96P15 392 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 MTG2Q9H4K7 406 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 SGK2Q9HBY8 427 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 METTL14Q9HCE5 456 aaKnown RBP16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 SUN2Q9UH99 717 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 BTBD3Q9Y2F9 522 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 PCDHGB2Q9Y5G2 931 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 WDFY3Q8IZQ1 3526 aa16.43■□□□□ 0.22
CHMP4A-204ENST00000530996 ZFYVE26Q68DK2 2539 aa16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 MUC22E2RYF6 1773 aaPredicted RBP16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 FREM2Q5SZK8 3169 aa16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 CALCAP01258 141 aa16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 ATXN1LP0C7T5 689 aaKnown RBP16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 CD27P26842 260 aa16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 MCCD1P59942 119 aaPredicted RBP16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 STILQ15468 1287 aa16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 PKDCCQ504Y2 493 aa16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 COBLL1Q53SF7 1204 aa16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 FAM133BQ5BKY9 247 aaKnown RBP16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 MPP7Q5T2T1 576 aa16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 RNF219Q5W0B1 726 aaPredicted RBP16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 KLHL10Q6JEL2 608 aa16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 C19orf48Q6RUI8 117 aa16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 LRSAM1Q6UWE0 723 aa16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 CCNI2Q6ZMN8 369 aaPredicted RBP16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 DHX40Q8IX18 779 aaKnown RBP16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 FMR1NBQ8N0W7 255 aaPredicted RBP16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 MDM1Q8TC05 714 aa16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 KAT5Q92993 513 aa16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 GTPBP4Q9BZE4 634 aaKnown RBP16.42■□□□□ 0.22
CHMP4A-204ENST00000530996 KCNK3O14649 394 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 MOCS3O95396 460 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 IGLV3-27P01718 113 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 APOEP02649 317 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 ASLP04424 464 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 KRT5P13647 590 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 CSKP41240 450 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 GRK6P43250 576 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 RPS24P62847 133 aaKnown RBP16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 KIAA0895LQ68EN5 471 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 ISM2Q6H9L7 571 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 NADSYN1Q6IA69 706 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 C1orf216Q8TAB5 229 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 BAHD1Q8TBE0 780 aaPredicted RBP16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 ADAM32Q8TC27 787 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 DQX1Q8TE96 717 aaKnown RBP16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 SLC35F5Q8WV83 523 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 IGSF8Q969P0 613 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 ACE2Q9BYF1 805 aaPredicted RBP16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 NUCKS1Q9H1E3 243 aaKnown RBP16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 PABPC3Q9H361 631 aaKnown RBP16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 AASDHPPTQ9NRN7 309 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 FBXL12Q9NXK8 326 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 FTSJ1Q9UET6 329 aa16.41■□□□□ 0.22
CHMP4A-204ENST00000530996 CKAP5Q14008 2032 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms