RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 NINJ2Q9NZG7 142 aa8.67□□□□□ -1.02
CTNND1-227ENST00000530748 DLGAP2Q9P1A6 1054 aa8.67□□□□□ -1.02
CTNND1-227ENST00000530748 SNX8Q9Y5X2 465 aa8.67□□□□□ -1.02
CTNND1-227ENST00000530748 ZW10O43264 779 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 XYLBO75191 536 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 KRT6AP02538 564 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 KRT6BP04259 564 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 ALADP13716 330 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 HPGDP15428 266 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 GP5P40197 560 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 RPL21P46778 160 aaKnown RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 KRT6CP48668 564 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 FSCN1Q16658 493 aaKnown RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 KATNAL2Q8IYT4 538 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 MICU2Q8IYU8 434 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 FBXO39Q8N4B4 442 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 ATXN2LQ8WWM7 1075 aaKnown RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 TMEM39AQ9NV64 488 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 MROH1Q8NDA8 1641 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 SALL3Q9BXA9 1300 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 TRDMT1O14717 391 aaKnown RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 EIF4BP23588 611 aaKnown RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 GRK4P32298 578 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 HPCAL1P37235 193 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 ELK3P41970 407 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 CASP7P55210 303 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 YWHAZP63104 245 aaKnown RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 FNDC3BQ53EP0 1204 aaKnown RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 CELF3Q5SZQ8 465 aaKnown RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 RETSATQ6NUM9 610 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 TRMT11Q7Z4G4 463 aaKnown RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 TFAP2DQ7Z6R9 452 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 SLC44A2Q8IWA5 706 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 STARD8Q92502 1023 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 ASB2Q96Q27 587 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 FUCA2Q9BTY2 467 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 RAD18Q9NS91 495 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 PSMD12O00232 456 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 FGF10O15520 208 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 AMPD1P23109 780 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 FAM98BQ52LJ0 330 aaKnown RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 CBWD3Q5JTY5 395 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 CBWD5Q5RIA9 395 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 ZNF544Q6NX49 715 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 OSGEPL1Q9H4B0 414 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 EPS8L2Q9H6S3 715 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 CD248Q9HCU0 757 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 RABGEF1Q9UJ41 708 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 ANKRD63C9JTQ0 380 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 ADM5C9JUS6 153 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 FAM20BO75063 409 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 MTA2O94776 668 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 DLGAP3O95886 979 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 GLI1P08151 1106 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 H2AFXP16104 143 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 TPH1P17752 444 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 ITGB6P18564 788 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 NCF4Q15080 339 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 CYP20A1Q6UW02 462 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 DEFB106AQ8N104 65 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 SLC2A14Q8TDB8 520 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 OXNAD1Q96HP4 312 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 ATXN3LQ9H3M9 355 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 RAD21L1Q9H4I0 556 aa8.66□□□□□ -1.02
CTNND1-227ENST00000530748 TDRKHQ9Y2W6 561 aaKnown RBP8.66□□□□□ -1.02
CTNND1-227ENST00000530748 LGALS2P05162 132 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 FYNP06241 537 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 PPP2R1BP30154 601 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 GUCA1AP43080 201 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-227ENST00000530748 NUP107P57740 925 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 TRAF2Q12933 501 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 NR6A1Q15406 480 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 AGKQ53H12 422 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 TBCELQ5QJ74 424 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 C16orf59Q7L2K0 433 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 RIOX2Q8IUF8 465 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 TMEM132CQ8N3T6 1108 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 ANKRD49Q8WVL7 239 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 FIG4Q92562 907 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 USP7Q93009 1102 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 TMEM159Q96B96 161 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 MAGED4Q96JG8 741 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 P2RX7Q99572 595 aaKnown RBP8.65□□□□□ -1.02
CTNND1-227ENST00000530748 ABHD16BQ9H3Z7 469 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 ACTR8Q9H981 624 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 THAP1Q9NVV9 213 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 UBA2Q9UBT2 640 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-227ENST00000530748 NCKAP1Q9Y2A7 1128 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 ERI2A8K979 691 aaKnown RBP8.65□□□□□ -1.02
CTNND1-227ENST00000530748 FAM220BPB1ANY3 271 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 RGS14O43566 566 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 PQBP1O60828 265 aaKnown RBP8.65□□□□□ -1.02
CTNND1-227ENST00000530748 KATNA1O75449 491 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 BAIAP3O94812 1187 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 BCL2L1Q07817 233 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 VAC14Q08AM6 782 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 PWP1Q13610 501 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 WASHC2DQ5SRD0 308 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 FGD2Q7Z6J4 655 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 KYQ8NBH2 561 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms