RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 RSC1A1Q92681 617 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 NAF1Q96HR8 494 aaKnown RBP5.25□□□□□ -1.57
CTR9-204ENST00000529355 ZNF845Q96IR2 970 aaPredicted RBP5.25□□□□□ -1.57
CTR9-204ENST00000529355 FAR2Q96K12 515 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 ZNF347Q96SE7 839 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 HERC2P3Q9BVR0 1158 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 SCNM1Q9BWG6 230 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 OSBPL5Q9H0X9 879 aaPredicted RBP5.25□□□□□ -1.57
CTR9-204ENST00000529355 MYLK2Q9H1R3 596 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 RMI1Q9H9A7 625 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.25□□□□□ -1.57
CTR9-204ENST00000529355 GPR52Q9Y2T5 361 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 TBC1D3DA0A087WVF3 549 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 TBC1D3IA0A087WXS9 549 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 TBC1D3EA0A087X179 549 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 TBC1D3KA0A087X1G2 549 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 TBC1D3BA6NDS4 549 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 TBC1D3FA6NER0 549 aaPredicted RBP5.24□□□□□ -1.57
CTR9-204ENST00000529355 TBC1D3LB9A6J9 549 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 BCAR3O75815 825 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 PLAUP00749 431 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 TBC1D3HP0C7X1 549 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 CYP19A1P11511 503 aaPredicted RBP5.24□□□□□ -1.57
CTR9-204ENST00000529355 HNRNPA0Q13151 305 aaKnown RBP5.24□□□□□ -1.57
CTR9-204ENST00000529355 CBFBQ13951 182 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 DHX8Q14562 1220 aaKnown RBP5.24□□□□□ -1.57
CTR9-204ENST00000529355 CCDC142Q17RM4 750 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 INO80DQ53TQ3 878 aaPredicted RBP5.24□□□□□ -1.57
CTR9-204ENST00000529355 TBC1D3GQ6DHY5 549 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 TBC1D3CQ6IPX1 549 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 WDR93Q6P2C0 686 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 RAB11FIP2Q7L804 512 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 C16orf71Q8IYS4 520 aaPredicted RBP5.24□□□□□ -1.57
CTR9-204ENST00000529355 TBC1D3Q8IZP1 549 aaPredicted RBP5.24□□□□□ -1.57
CTR9-204ENST00000529355 GALNT15Q8N3T1 639 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 ANKRD42Q8N9B4 389 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 TRAPPC12Q8WVT3 735 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 RUBCNQ92622 972 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 PIGKQ92643 395 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 FAM167BQ9BTA0 163 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 PAGR1Q9BTK6 254 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 PRDM16Q9HAZ2 1276 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 TMEM184CQ9NVA4 438 aa5.24□□□□□ -1.57
CTR9-204ENST00000529355 C19orf53Q9UNZ5 99 aaPredicted RBP5.24□□□□□ -1.57
CTR9-204ENST00000529355 COL3A1P02461 1466 aaPredicted RBP5.24□□□□□ -1.57
CTR9-204ENST00000529355 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.23□□□□□ -1.57
CTR9-204ENST00000529355 WDR91A4D1P6 747 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 TTC34A8MYJ7 566 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 E7EVH7 732 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 FAM155BO75949 473 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 CNTN5O94779 1100 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 LARGE1O95461 756 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 SLC3A2P08195 630 aaKnown RBP5.23□□□□□ -1.57
CTR9-204ENST00000529355 ALDOCP09972 364 aaKnown RBP5.23□□□□□ -1.57
CTR9-204ENST00000529355 DHRS4L1P0CG22 281 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 FBLP22087 321 aaKnown RBP5.23□□□□□ -1.57
CTR9-204ENST00000529355 CST5P28325 142 aaPredicted RBP5.23□□□□□ -1.57
CTR9-204ENST00000529355 SERPINA4P29622 427 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 RCAN1P53805 252 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 MRPS21P82921 87 aaKnown RBP5.23□□□□□ -1.57
CTR9-204ENST00000529355 CFHR1Q03591 330 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 Q4G0T1 1027 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 C4orf46Q504U0 113 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 SLC39A5Q6ZMH5 540 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 RBM44Q6ZP01 1051 aaKnown RBP5.23□□□□□ -1.57
CTR9-204ENST00000529355 NEK8Q86SG6 692 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 ARL14EPQ8N8R7 260 aaPredicted RBP5.23□□□□□ -1.57
CTR9-204ENST00000529355 IP6K1Q92551 441 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 P2RY11Q96G91 374 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 ABHD14AQ9BUJ0 271 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 HDHD5Q9BXW7 423 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 RNF26Q9BY78 433 aaPredicted RBP5.23□□□□□ -1.57
CTR9-204ENST00000529355 TLR8Q9NR97 1041 aaKnown RBP5.23□□□□□ -1.57
CTR9-204ENST00000529355 LIN7CQ9NUP9 197 aaKnown RBP5.23□□□□□ -1.57
CTR9-204ENST00000529355 FBXO4Q9UKT5 387 aa5.23□□□□□ -1.57
CTR9-204ENST00000529355 COPG1Q9Y678 874 aaKnown RBP5.23□□□□□ -1.57
CTR9-204ENST00000529355 CYP3A7-CYP3A51PA0A087WV96 503 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 C2CD4BA6NLJ0 364 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 INPPL1O15357 1258 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 ENO1P06733 434 aaKnown RBP5.22□□□□□ -1.57
CTR9-204ENST00000529355 IGFBP2P18065 325 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 KELP23276 732 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 CYP3A7P24462 503 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 TACR3P29371 465 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 B4GALNT1Q00973 533 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 TLE3Q04726 772 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 SRSF7Q16629 238 aaKnown RBP eCLIP5.22□□□□□ -1.57
CTR9-204ENST00000529355 FAM110CQ1W6H9 321 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 MTX3Q5HYI7 312 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 EARS2Q5JPH6 523 aaKnown RBP5.22□□□□□ -1.57
CTR9-204ENST00000529355 PAPD7Q5XG87 772 aaKnown RBP5.22□□□□□ -1.57
CTR9-204ENST00000529355 ZNF474Q6S9Z5 364 aaPredicted RBP5.22□□□□□ -1.57
CTR9-204ENST00000529355 AFG1LQ8WV93 481 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 LTV1Q96GA3 475 aaPredicted RBP5.22□□□□□ -1.57
CTR9-204ENST00000529355 SENP7Q9BQF6 1050 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 HERPUD2Q9BSE4 406 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 SPRTNQ9H040 489 aaPredicted RBP5.22□□□□□ -1.57
CTR9-204ENST00000529355 CHODLQ9H9P2 273 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 MTMR4Q9NYA4 1195 aa5.22□□□□□ -1.57
CTR9-204ENST00000529355 FEM1BQ9UK73 627 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms