RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 A0A1W2PQH9 124 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 COCHO43405 550 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 NARSO43776 548 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 GFPT2O94808 682 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 PRAMEF12O95522 483 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 TBX18O95935 607 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 CKMP06732 381 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 SRFP11831 508 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 MYCLP1P12525 358 aaPredicted RBP6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 LCP1P13796 627 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 ZNF24P17028 368 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 PSMC3P17980 439 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 CDH5P33151 784 aaPredicted RBP6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 ACADSBP45954 432 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 RGS7P49802 495 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 NFKB2Q00653 900 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 SIM2Q14190 667 aaPredicted RBP6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 FIGNQ5HY92 759 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 KLHDC10Q6PID8 442 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 NXPE4Q6UWF7 544 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 TRIM67Q6ZTA4 783 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 BHLHA9Q7RTU4 235 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 CACNA2D4Q7Z3S7 1137 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 ZNF677Q86XU0 584 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 SCUBE3Q8IX30 993 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 ARL6IP6Q8N6S5 226 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 BPIFB1Q8TDL5 484 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 DEPDC1BQ8WUY9 529 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 ZFPM2Q8WW38 1151 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 BAP1Q92560 729 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 NDRG1Q92597 394 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 TBC1D31Q96DN5 1066 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 ZFRQ96KR1 1074 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 SH3GL3Q99963 347 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 NUP58Q9BVL2 599 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 TRMT61BQ9BVS5 477 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 ULBP1Q9BZM6 244 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 EDEM3Q9BZQ6 932 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 XPO4Q9C0E2 1151 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 SMG9Q9H0W8 520 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 SMOC2Q9H3U7 446 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 KIF9Q9HAQ2 790 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 CNGB3Q9NQW8 809 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 SLC2A4RGQ9NR83 387 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 IFNKQ9P0W0 207 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 WNT16Q9UBV4 365 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 ZMAT5Q9UDW3 170 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 POLG2Q9UHN1 485 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 CYTH4Q9UIA0 394 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 MYO6Q9UM54 1294 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 ARHGAP26Q9UNA1 814 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 CCL26Q9Y258 94 aa6.54□□□□□ -1.36
ATPAF1-209ENST00000529214 TMEM238LA0A1B0GVL6 79 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 A6NHS1 94 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 YJEFN3A6XGL0 299 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 FAM25EA8MYX2 175 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 E7ENQ6 273 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ARNTLO00327 626 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ZNF263O14978 683 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 CHADO15335 359 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TLR5O60602 858 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 FBXO21O94952 628 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 RPLP1P05386 114 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 RALAP11233 206 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 RARGP13631 454 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 CHRNB2P17787 502 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 GDI1P31150 447 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ATP5C1P36542 298 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 DAOAP59103 153 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 RAB15P59190 212 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 YWHAGP61981 247 aaKnown RBP eCLIP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ZBED6P86452 979 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 SIGLEC14Q08ET2 396 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ADIGQ0VDE8 80 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 GRM2Q14416 872 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 GRAMD1BQ3KR37 738 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ARHGAP29Q52LW3 1261 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 HHATQ5VTY9 493 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 BSPRYQ5W0U4 402 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 CCDC81Q6ZN84 652 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 IRF2BP2Q7Z5L9 587 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 GAS2L3Q86XJ1 694 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TRIM42Q8IWZ5 723 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 SIX6OS1Q8N1H7 587 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ARHGAP18Q8N392 663 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TTC8Q8TAM2 541 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 RIN3Q8TB24 985 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 SH3RF2Q8TEC5 729 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 IRGQQ8WZA9 623 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 IRF7Q92985 503 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 NACC2Q96BF6 587 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 ASIC4Q96FT7 647 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 PPP1R13BQ96KQ4 1090 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 BAG1Q99933 345 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 FAM83CQ9BQN1 747 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 SLC39A3Q9BRY0 314 aa6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 MAK16Q9BXY0 300 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-209ENST00000529214 TTYH3Q9C0H2 523 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms