RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 XPO7Q9UIA9 1087 aaKnown RBP34.24■■■■□ 3.07
SSSCA1-205ENST00000527920 DNAH14Q0VDD8 3507 aa34.23■■■■□ 3.07
SSSCA1-205ENST00000527920 KCNU1A8MYU2 1149 aa34.23■■■■□ 3.07
SSSCA1-205ENST00000527920 SYNCRIPO60506 623 aaKnown RBP34.23■■■■□ 3.07
SSSCA1-205ENST00000527920 NOS2P35228 1153 aa34.23■■■■□ 3.07
SSSCA1-205ENST00000527920 KLK7P49862 253 aa34.23■■■■□ 3.07
SSSCA1-205ENST00000527920 LIMK1P53667 647 aa34.23■■■■□ 3.07
SSSCA1-205ENST00000527920 POLR2FP61218 127 aaKnown RBP34.23■■■■□ 3.07
SSSCA1-205ENST00000527920 RPS24P62847 133 aaKnown RBP34.23■■■■□ 3.07
SSSCA1-205ENST00000527920 SERPINA13PQ6UXR4 307 aa34.23■■■■□ 3.07
SSSCA1-205ENST00000527920 CYP2U1Q7Z449 544 aa34.23■■■■□ 3.07
SSSCA1-205ENST00000527920 MSANTD4Q8NCY6 345 aa34.23■■■■□ 3.07
SSSCA1-205ENST00000527920 SORCS1Q8WY21 1168 aa34.23■■■■□ 3.07
SSSCA1-205ENST00000527920 PLA2G4CQ9UP65 541 aa34.23■■■■□ 3.07
SSSCA1-205ENST00000527920 SLC30A4O14863 429 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 GRAP2O75791 330 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 ATP5BP06576 529 aaKnown RBP34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 DLDP09622 509 aaKnown RBP34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 TACR2P21452 398 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 DPP6P42658 865 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 SF3A2Q15428 464 aaKnown RBP34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 SYCP1Q15431 976 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 CCDC6Q16204 474 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 TAF3Q5VWG9 929 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 APTXQ7Z2E3 356 aaKnown RBP34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 DGLUCYQ7Z3D6 616 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 ERICH1Q86X53 443 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 FRMD1Q8N878 549 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 C18orf8Q96DM3 657 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 MYEOVQ96EZ4 313 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 ERGIC2Q96RQ1 377 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 BPIFA3Q9BQP9 254 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 TMEM245Q9H330 911 aa34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 NOCTQ9UK39 431 aaKnown RBP34.22■■■■□ 3.07
SSSCA1-205ENST00000527920 IGHV1OR15-9A0A0B4J2B8 117 aa34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 LOC105378220A0A1B0GUY1 285 aaPredicted RBP34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 EPHB6O15197 1021 aa34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 AP5Z1O43299 807 aa34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 C7P10643 843 aa34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 ABCB4P21439 1286 aa34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 PRKCHP24723 683 aa34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 CD70P32970 193 aa34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 SOX5P35711 763 aa34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 MATKP42679 507 aa34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 AASDHQ4L235 1098 aaPredicted RBP34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 MBLAC2Q68D91 279 aa34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 CHSY1Q86X52 802 aa34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 CCDC117Q8IWD4 279 aaPredicted RBP34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 PRMT1Q99873 361 aaKnown RBP34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 STIM2Q9P246 746 aa34.21■■■■□ 3.07
SSSCA1-205ENST00000527920 CDK11BP21127 795 aaKnown RBP34.2■■■■□ 3.07
SSSCA1-205ENST00000527920 DHPSP49366 369 aaPredicted RBP34.2■■■■□ 3.07
SSSCA1-205ENST00000527920 ATXN1P54253 815 aaKnown RBP34.2■■■■□ 3.07
SSSCA1-205ENST00000527920 NOMO3P69849 1222 aa34.2■■■■□ 3.07
SSSCA1-205ENST00000527920 CDH18Q13634 790 aa34.2■■■■□ 3.07
SSSCA1-205ENST00000527920 PTPRNQ16849 979 aa34.2■■■■□ 3.07
SSSCA1-205ENST00000527920 TTC39BQ5VTQ0 682 aaPredicted RBP34.2■■■■□ 3.07
SSSCA1-205ENST00000527920 RAP1GAP2Q684P5 730 aa34.2■■■■□ 3.07
SSSCA1-205ENST00000527920 LGI2Q8N0V4 545 aa34.2■■■■□ 3.07
SSSCA1-205ENST00000527920 NT5C3BQ969T7 300 aa34.2■■■■□ 3.07
SSSCA1-205ENST00000527920 TTC17Q96AE7 1141 aa34.2■■■■□ 3.07
SSSCA1-205ENST00000527920 MKRN2Q9H000 416 aaKnown RBP34.2■■■■□ 3.07
SSSCA1-205ENST00000527920 PRDM16Q9HAZ2 1276 aa34.2■■■■□ 3.07
SSSCA1-205ENST00000527920 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 F5H5T6 163 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 GFPT2O94808 682 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 LUC7L3O95232 432 aaKnown RBP34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 MMEP08473 750 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 POLR2EP19388 210 aaKnown RBP34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 HOXD12P35452 270 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 CDR2Q01850 454 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 CAMK2GQ13555 558 aaPredicted RBP34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 XYLT1Q86Y38 959 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 TMEFF1Q8IYR6 380 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 AOPEPQ8N6M6 819 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 PGAP3Q96FM1 320 aaPredicted RBP34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 SPAG5Q96R06 1193 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 FBRSQ9HAH7 460 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 NLRC4Q9NPP4 1024 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 USP36Q9P275 1121 aaKnown RBP34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 STAP1Q9ULZ2 295 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 THADAQ6YHU6 1953 aa34.19■■■■□ 3.06
SSSCA1-205ENST00000527920 CKAP5Q14008 2032 aa34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 GDF9O60383 454 aa34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 EPHX1P07099 455 aa34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 STAT1P42224 750 aa34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 RPL6Q02878 288 aaKnown RBP34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 UBXN1Q04323 297 aa34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 LMAN2Q12907 356 aa34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 FNDC3BQ53EP0 1204 aaKnown RBP34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 KIAA1324Q6UXG2 1013 aaKnown RBP34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 NEK11Q8NG66 645 aa34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 CYB5D2Q8WUJ1 264 aa34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 RNF34Q969K3 372 aa34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 NPY6RQ99463 290 aa34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 SLC6A17Q9H1V8 727 aa34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 SMOC1Q9H4F8 434 aa34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 CYP8B1Q9UNU6 501 aa34.18■■■■□ 3.06
SSSCA1-205ENST00000527920 MUC22E2RYF6 1773 aaPredicted RBP34.17■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms