RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 DNAH14Q0VDD8 3507 aa16.11■□□□□ 0.17
CAPN1-213ENST00000527897 CEP192Q8TEP8 1941 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 PLXND1Q9Y4D7 1925 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 NPC1O15118 1278 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 TIMM44O43615 452 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 GLI1P08151 1106 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 MMEP08473 750 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 ABCB4P21439 1286 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 KCNA4P22459 653 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 CD70P32970 193 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 NUMBP49757 651 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 UBXN1Q04323 297 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 CDH18Q13634 790 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 E2F5Q15329 346 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 SYCP1Q15431 976 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 ANO6Q4KMQ2 910 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 C2CD6Q53TS8 623 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 MS4A13Q5J8X5 152 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 MBLAC2Q68D91 279 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 ERICH1Q86X53 443 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 NETO1Q8TDF5 533 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 BTN2A3PQ96KV6 586 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 MRGPRX1Q96LB2 322 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 SLC2A13Q96QE2 648 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 CD93Q9NPY3 652 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 RXFP3Q9NSD7 469 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 ASNSD1Q9NWL6 643 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 DLL3Q9NYJ7 618 aa16.1■□□□□ 0.17
CAPN1-213ENST00000527897 ATXN2Q99700 1313 aaKnown RBP16.1■□□□□ 0.17
CAPN1-213ENST00000527897 DCDC2BA2VCK2 349 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 H0Y626 953 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 GOLGA8SH3BPF8 625 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 EPHB6O15197 1021 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 FOXD2O60548 495 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-213ENST00000527897 ZNF217O75362 1048 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 DAB1O75553 588 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 IGLV3-25P01717 112 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 ATP5BP06576 529 aaKnown RBP16.09■□□□□ 0.17
CAPN1-213ENST00000527897 POLR2EP19388 210 aaKnown RBP16.09■□□□□ 0.17
CAPN1-213ENST00000527897 TACR2P21452 398 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 CCR1P32246 355 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 PTGER3P43115 390 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 ATXN1P54253 815 aaKnown RBP16.09■□□□□ 0.17
CAPN1-213ENST00000527897 PLA2G2CQ5R387 149 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 MPP7Q5T2T1 576 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 FAM102AQ5T9C2 384 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-213ENST00000527897 NAA35Q5VZE5 725 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 MMS22LQ6ZRQ5 1243 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 ADIPOR2Q86V24 386 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 CIR1Q86X95 450 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-213ENST00000527897 NEK11Q8NG66 645 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 EPS8L1Q8TE68 723 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 SLC20A1Q8WUM9 679 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 CPA5Q8WXQ8 436 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 C18orf8Q96DM3 657 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 NAT10Q9H0A0 1025 aaKnown RBP16.09■□□□□ 0.17
CAPN1-213ENST00000527897 PRDM16Q9HAZ2 1276 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 CD248Q9HCU0 757 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.09■□□□□ 0.17
CAPN1-213ENST00000527897 LIMA1Q9UHB6 759 aaKnown RBP16.09■□□□□ 0.17
CAPN1-213ENST00000527897 GON4LQ3T8J9 2241 aa16.09■□□□□ 0.17
CAPN1-213ENST00000527897 IGHV1OR15-9A0A0B4J2B8 117 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 LGALS16A8MUM7 142 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 KCNU1A8MYU2 1149 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 PATE3B3GLJ2 98 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 F5H5T6 163 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 M0QYT0 321 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 AP5Z1O43299 807 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 NDUFS2O75306 463 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 SLC2A3P11169 496 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 LMAN2Q12907 356 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 LYSMD4Q5XG99 296 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 SMYD5Q6GMV2 418 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 SLC36A4Q6YBV0 504 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 SLC26A9Q7LBE3 791 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 ERMP1Q7Z2K6 904 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 TMPRSS6Q8IU80 811 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.08■□□□□ 0.16
CAPN1-213ENST00000527897 MSANTD4Q8NCY6 345 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 DDX1Q92499 740 aaKnown RBP16.08■□□□□ 0.16
CAPN1-213ENST00000527897 SIPA1Q96FS4 1042 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 MKRN2Q9H000 416 aaKnown RBP16.08■□□□□ 0.16
CAPN1-213ENST00000527897 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.08■□□□□ 0.16
CAPN1-213ENST00000527897 SIK3Q9Y2K2 1263 aa16.08■□□□□ 0.16
CAPN1-213ENST00000527897 KHNYNO15037 678 aaKnown RBP16.07■□□□□ 0.16
CAPN1-213ENST00000527897 LUC7L3O95232 432 aaKnown RBP16.07■□□□□ 0.16
CAPN1-213ENST00000527897 DLDP09622 509 aaKnown RBP16.07■□□□□ 0.16
CAPN1-213ENST00000527897 ACADMP11310 421 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 ATP1A3P13637 1013 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 ITPKAP23677 461 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 NOS2P35228 1153 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 SOX5P35711 763 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 GGCXP38435 758 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 STAT1P42224 750 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 SULT1E1P49888 294 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 ENPP2Q13822 863 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 NCAPHQ15003 741 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 FSCBQ5H9T9 825 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 IL31Q6EBC2 164 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 PHLDB2Q86SQ0 1253 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms